LOCUS BC034502 2162 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens choline dehydrogenase, mRNA (cDNA clone MGC:26969
IMAGE:4824572), complete cds.
ACCESSION BC034502
VERSION BC034502.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2162)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27501455.
FEATURES Location/Qualifiers
source 1..2162
/db_xref="H-InvDB:HIT000051174"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26969 IMAGE:4824572"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2162
/gene="CHDH"
/db_xref="GeneID:55349"
/db_xref="HGNC:HGNC:24288"
CDS 200..1984
/gene="CHDH"
/codon_start=1
/product="choline dehydrogenase"
/protein_id="AAH34502.1"
/db_xref="GeneID:55349"
/db_xref="HGNC:HGNC:24288"
/translation="MWCLLRGLGRPGALARGALGQQQSLGARALASAGSESRDEYSYV
VVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLCDDR
YNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDY
AHCLPYFRKAQGHELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMN
GFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFEGTRAVGVE
YVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNL
QDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRSQPG
VPHPDIQFHFLPSQVIDHGRVPTQQEAYQVHVGPMRGTSVGWLKLRSANPQDHPVIQP
NYLSTETDIEDFRLCVKLTREIFAQEALAPFRGKELQPGSHIQSDKEIDAFVRAKADS
AYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEK
AADIIKGQPALWDKDVPVYKPRTLATQR"
BASE COUNT 455 a 670 c 676 g 361 t
ORIGIN
1 agcgggccgc ggccacccgc tcctcccgct ccggtcccga ctgtcgggct ctcggccgag
61 tcgccccgga caatcacaaa gagtgtgtag gccagccccg gtcacagagt gcaccgtatc
121 ctgtcacttc tggatgtgag ggagaagtga gtcatctcat tcccctccgt ggatcagagg
181 acttggacta gatagaagca tgtggtgtct cctacgaggc ctgggccggc ctggagccct
241 ggcacgggga gccctggggc agcagcaatc cctgggtgcc cgggccctgg ccagcgcagg
301 ctctgagagc cgggacgagt acagctatgt ggtggtgggc gcgggctcgg cgggctgcgt
361 gctggctggg aggctcacgg aggaccccgc cgagcgcgtg ctgctgctgg aggccgggcc
421 caaggacgtg cgcgcgggga gcaagcggct ctcgtggaag atccacatgc ccgcggccct
481 ggtggccaac ctgtgcgacg acaggtacaa ctggtgctac cacacagagg tgcagcgggg
541 cctggacggc cgcgtgctgt actggccacg cggccgcgtc tggggtggct cctcatccct
601 caatgccatg gtctacgtcc gtgggcacgc cgaggactac gagcgctggc agcgccaggg
661 cgcccgcggc tgggactacg cgcactgcct gccctacttc cgcaaggcgc agggccacga
721 gctgggcgcc agccggtacc ggggcgccga tggcccgctg cgggtgtccc ggggcaagac
781 caaccacccg ctgcactgcg cattcctgga ggccacgcag caggccggct acccgctcac
841 cgaggacatg aatggcttcc agcaggaggg cttcggctgg atggacatga ccatccatga
901 aggcaaacgg tggagcgcag cctgtgccta cctgcaccca gcactgagcc gcaccaacct
961 caaggccgag gccgagacgc ttgtgagcag ggtgctattt gagggcaccc gtgcagtggg
1021 cgtggagtat gtcaagaatg gccagagcca cagggcttat gccagcaagg aggtgattct
1081 gagtggaggt gccatcaact ctccacagct gctcatgctc tctggcatcg ggaatgctga
1141 tgacctcaag aaactgggca tccctgtggt gtgccaccta cctggggttg gccagaacct
1201 gcaagaccac ctggagatct acattcagca ggcatgcacc cgccctatca ccctccattc
1261 agcacagaag cccctgcgga aggtctgcat tggtctggag tggctctgga aattcacagg
1321 ggagggagcc actgcccatc tggaaacagg tgggttcatc cgcagccagc ctggggtccc
1381 ccacccggac atccagttcc atttcctgcc atcccaagtg attgaccacg ggcgggtccc
1441 cacccagcag gaggcttacc aggtacatgt ggggcccatg cggggcacga gtgtgggctg
1501 gctcaaactg agaagtgcca atccccaaga ccaccctgtg atccagccca actacttgtc
1561 aacagaaact gatattgagg atttccgtct gtgtgtgaag ctcaccagag aaatttttgc
1621 acaggaagcc ctggctccgt tccgagggaa agagctccag ccaggaagcc acattcagtc
1681 agataaagag atagatgcct ttgtgcgggc aaaagccgac agcgcctacc acccctcgtg
1741 cacctgtaag atgggccagc cctccgatcc cactgccgtg gtggatccgc agacaagggt
1801 cctcggggtg gaaaacctca gggtcgtcga tgcctccatc atgcctagca tggtcagcgg
1861 caacctgaac gcccccacaa tcatgatcgc agagaaggca gctgacatta tcaaggggca
1921 gcctgcactc tgggacaaag atgtccctgt ctacaagccc aggacgctgg ccacccagcg
1981 ctaagacagt tgctgctgga ggatgaccag ggaagccccc tgataagcca agagggccag
2041 cacagccctt gctcccaggc tcctgcctga aactatctag cacactagga cccaggtggt
2101 accctactca gtggctgaga attggataaa gtcttgggaa atgagacaaa aaaaaaaaaa
2161 aa
//