LOCUS BC034501 2467 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens homeodomain interacting protein kinase 4, mRNA (cDNA
clone MGC:26964 IMAGE:4823304), complete cds.
ACCESSION BC034501
VERSION BC034501.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2467)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2467)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034501.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222353.
FEATURES Location/Qualifiers
source 1..2467
/db_xref="H-InvDB:HIT000051173"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26964 IMAGE:4823304"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2467
/gene="HIPK4"
/gene_synonym="FLJ32818"
/db_xref="GeneID:147746"
/db_xref="HGNC:HGNC:19007"
CDS 286..2136
/gene="HIPK4"
/gene_synonym="FLJ32818"
/codon_start=1
/product="homeodomain interacting protein kinase 4"
/protein_id="AAH34501.1"
/db_xref="GeneID:147746"
/db_xref="HGNC:HGNC:19007"
/translation="MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKN
DAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKE
NNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFG
SASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGN
NEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANPWQLKSSADYLAETKVR
PLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE
RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPY
YCLAEEKEAAGMGSVAGSSPFFREEKAPGMQRAIDQLDDLSLQEAGHGLWGETCTNAV
SDMMVPLKAAITGHHVPDSGPEPILAFYSSRLAGRHKARKPPAGSKSDSNFSNLIRLS
QVSPEDDRPCRGSSWEEGEHLGASAEPLAILQRDEDGPNIDNMTMEAERPDPELFDPS
SCPGEWLSEPDCTLESVRGPRAQGLPPRRSHQHGPPRGATSFLQHVTGHH"
BASE COUNT 499 a 805 c 734 g 429 t
ORIGIN
1 agagccactc aacagcgctg gaacccattc ggtggggcct ggggcccctc atcccaagcc
61 aggagggttt ctggggaggg gtgcagcccc tggcagactg acagtgtggc ctgggggttt
121 gggggtgcca gggaagcagg ggccaacctc ataggaggag acacgagtgc ggttctcttt
181 cccccactgg ggggcctgct gtgtcagcag ccaggcggga ggcctgggcg gcagagccag
241 tggtacaggg gcctgggcag ggcggtgtct ggcagcagcg gcaccatgtc caccatccag
301 tcggagactg actgctacga catcatcgag gtcttgggca aggggacctt cggggaggta
361 gccaagggct ggcggcggag cacgggcgag atggtggcca tcaagatcct caagaatgac
421 gcctaccgca accgcatcat caaaaacgag ctgaagctgc tgcactgcat gcgaggccta
481 gaccctgaag aggcccacgt catccgcttc cttgagttct tccatgacgc cctcaagttc
541 tacctggtct ttgagctgct ggagcaaaac cttttcgagt tccagaagga gaacaacttc
601 gcgcccctcc ccgcccgcca catccgtaca gtcaccctgc aggtgctcac agccctggcc
661 cggctcaagg agctggctat catccacgct gatctcaagc ctgagaacat catgctggtg
721 gaccagaccc gctgcccctt cagggtcaag gtgattgact tcggatccgc cagcattttc
781 agcgaggtgc gctacgtgaa ggagccatac atccagtcgc gcttctaccg ggcccctgag
841 atcctgctgg ggctgccctt ctgcgagaag gtggacgtgt ggtccctggg ctgcgtcatg
901 gctgagctgc acctgggctg gcctctctac cccggcaaca acgagtacga ccaggtgcgc
961 tacatctgcg aaacccaggg cctgcccaag ccacacctgt tgcacgccgc ctgcaaggcc
1021 caccacttct tcaagcgcaa cccccaccct gacgctgcca acccctggca gctcaagtcc
1081 tcggctgact acctggccga gacgaaggtg cgcccattgg agcgccgcaa gtatatgctc
1141 aagtcgttgg accagattga gacagtgaat ggtggcagtg tggccagtcg gctaaccttc
1201 cctgaccggg aggcgctggc ggagcacgcc gacctcaaga gcatggtgga gctgatcaag
1261 cgcatgctga cctgggagtc acacgaacgc atcagcccca gtgctgccct gcgccacccc
1321 ttcgtgtcca tgcagcagct gcgcagtgcc cacgagacca cccactacta ccagctctcg
1381 ctgcgcagct accgcctctc gctgcaagtg gaggggaagc cccccacgcc cgtcgtggcc
1441 gcagaagatg ggacccccta ctactgtctg gctgaggaga aggaggctgc gggtatgggc
1501 agtgtggccg gcagcagccc cttcttccga gaggagaagg caccaggtat gcaaagagcc
1561 atcgaccagc tggatgacct gagtctgcag gaggctgggc atgggctgtg gggtgagacc
1621 tgcaccaatg cggtctccga catgatggtc cccctcaagg cagccatcac tggccaccat
1681 gtgcccgact cgggccctga gcccatcctg gccttctaca gcagccgcct ggcaggccgc
1741 cacaaggccc gcaagccacc tgcgggttcc aagtccgact ccaacttcag caacctcatt
1801 cggctgagcc aggtctcgcc tgaggatgac aggccctgcc ggggcagcag ctgggaggaa
1861 ggagagcatc tcggggcctc tgctgagcca ctggccatcc tgcagcgaga tgaggatggg
1921 cccaacattg acaacatgac catggaagct gagaggccag accctgagct cttcgacccc
1981 agcagctgtc ctggagaatg gctgagtgag ccagactgca ccctggagag cgtcaggggc
2041 ccacgggctc aggggctccc accccgccgc tcccaccagc atggtccacc ccggggggcc
2101 accagcttcc tccagcatgt caccgggcac cactgatggt gattccaccc ctgcccatca
2161 ctgggggctg cgctagctgg gctggcattc cctcccaacc tgaactgctc ctcagagcca
2221 tctcctgaac ccacaaatta ttcttacaga aagatagtta tccagaaatt ctcattcccc
2281 gtctgcggtg cggtgcgtgc ctgcacacct ctcctaaaca cagcagggct ttggagtctg
2341 gcccatgctc cttggccaga aggacagcag gaaagggggc tgcaccccgc tggccctgcg
2401 ctcgcccttg gccctgctgc ctctgtctat ttcaatatag aactgttcag caaaaaaaaa
2461 aaaaaaa
//