LOCUS BC034488 3204 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1,
mRNA (cDNA clone MGC:26501 IMAGE:4826422), complete cds.
ACCESSION BC034488
VERSION BC034488.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC034488.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 4.
FEATURES Location/Qualifiers
source 1..3204
/db_xref="H-InvDB:HIT000051163_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26501 IMAGE:4826422"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3204
/gene="ABCF1"
/gene_synonym="ABC27"
/db_xref="GeneID:23"
/db_xref="HGNC:HGNC:70"
/db_xref="MIM:603429"
CDS 41..2578
/gene="ABCF1"
/gene_synonym="ABC27"
/codon_start=1
/product="ATP-binding cassette, sub-family F (GCN20),
member 1"
/protein_id="AAH34488.1"
/db_xref="GeneID:23"
/db_xref="HGNC:HGNC:70"
/db_xref="MIM:603429"
/translation="MPKAPKQQPPEPEWIGDGESTSPSDKVVKKGKKDKKIKKTFFEE
LAVEDKQAGEEEKVLKEKEQQQQQQQQQQKKKRDTRKGRRKKDVDDDGEEKELMERLK
KLSVPTSDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEEEEKHPPKPAKPEKNR
INKAVPEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGK
EKAKKAEQGSEEEGEGEEEEEEGGESKADDPYAHLSKKEKKKLKKQMEYERQVASLKA
ANAAENDFSVSQAEMSSRQAMLENASDIKLEKFSISAHGKELFVNADLYIVAGRRYGL
VGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLE
EERRLQGQLEQGDDTAAERLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQ
KFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQ
GFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGK
STKQAEKQTKEALTRKQQKCRRKNQDEESQEAPELLKRPKEYTVRFTFPDPPPLSPPV
LGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEM
RKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQI
CKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHD
ARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVMVSRPRE"
BASE COUNT 910 a 772 c 923 g 599 t
ORIGIN
1 agcaccgggc gccgccacag tagctgtaac tgccaccgcg atgccgaagg cgcccaagca
61 gcagccgccg gagcccgagt ggatcgggga cggagagagc acgagcccat cagacaaagt
121 ggtgaagaaa gggaagaagg acaagaagat caaaaaaacg ttctttgaag agctggcagt
181 agaagataaa caggctgggg aagaagagaa agtgctcaag gagaaggagc agcagcagca
241 gcaacagcaa cagcagcaaa aaaaaaagcg agatacccga aaaggcaggc ggaagaagga
301 tgtggatgat gatggagaag agaaagagct catggagcgt cttaagaagc tctcagtgcc
361 aaccagtgat gaggaggatg aagtacccgc cccaaaaccc cgcggaggga agaaaaccaa
421 gggtggtaat gtttttgcag ccctgattca ggatcagagt gaggaagagg aggaggaaga
481 aaaacatcct cctaagcctg ccaagccgga gaagaatcgg atcaataagg ccgtacctga
541 ggaacagcag cctgcactca agggcaaaaa gggaaaggaa gagaagtcaa aagggaaggc
601 taagcctcaa aataaattcg ctgctctgga caatgaagag gaggataaag aagaagaaat
661 tataaaggaa aaggagcctc ccaaacaagg gaaggagaag gccaagaagg cagagcaggg
721 ttcagaggaa gaaggagaag gggaagaaga ggaggaggaa ggaggagagt ctaaggcaga
781 tgatccctat gctcatctta gcaaaaagga gaagaaaaag ctgaaaaaac agatggagta
841 tgagcgccaa gtggcttcat taaaagcagc caatgcagct gaaaatgact tctccgtgtc
901 ccaggcggag atgtcctccc gccaagccat gttagaaaat gcatctgaca tcaagctgga
961 gaagttcagc atctccgctc atggcaagga gctgttcgtc aatgcagacc tgtacattgt
1021 agccggccgc cgctacgggc tggtaggacc caatggcaag ggcaagacca cactcctcaa
1081 gcacattgcc aaccgagccc tgagcatccc tcccaacatt gatgtgttgc tgtgtgagca
1141 ggaggtggta gcagatgaga caccagcagt ccaggctgtt cttcgagctg acaccaagcg
1201 attgaagctg ctggaagagg agcggcggct tcagggacag ctggaacaag gggatgacac
1261 agctgctgag aggctagaga aggtgtatga ggaattgcgg gccactgggg cggcagctgc
1321 agaggccaaa gcacggcgga tcctggctgg cctgggcttt gaccctgaaa tgcagaatcg
1381 acccacacag aagttctcag ggggctggcg catgcgtgtc tccctggcca gggcactgtt
1441 catggagccc acactgctga tgctggatga gcccaccaac cacctggacc tcaacgctgt
1501 catctggctt aataactacc tccagggctg gcggaagacc ttgctgatcg tctcccatga
1561 ccagggcttc ttggatgatg tctgcactga tatcatccac ctcgatgccc agcggctcca
1621 ctactatagg ggcaattaca tgaccttcaa aaagatgtac cagcagaagc agaaagaact
1681 gctgaaacag tatgagaagc aagagaaaaa gctgaaggag ctgaaggcag gcgggaagtc
1741 caccaagcag gcggaaaaac aaacgaagga agccctgact cggaagcagc agaaatgccg
1801 acggaaaaac caagatgagg aatcccagga ggcccctgag ctcctgaagc gccctaagga
1861 gtacactgtg cgcttcactt ttccagaccc cccaccactc agccctccag tgctgggtct
1921 gcatggtgtg acattcggct accagggaca gaaaccactc tttaagaact tggattttgg
1981 catcgacatg gattcaagga tttgcattgt gggccctaat ggtgtgggga agagtacgct
2041 actcctgctg ctgactggca agctgacacc gacccatggg gaaatgagaa agaaccaccg
2101 gctgaaaatt ggcttcttca accagcagta tgcagagcag ctgcgcatgg aggagacgcc
2161 cactgagtac ctgcagcggg gcttcaacct gccctaccag gatgcccgca agtgcctggg
2221 ccgcttcggc ctggagagtc acgcccacac catccagatc tgcaaactct ctggtggtca
2281 gaaggcgcga gttgtgtttg ctgagctggc ctgtcgggaa cctgatgtcc tcatcttgga
2341 cgagccaacc aataacctgg acatagagtc tattgatgct ctaggggagg ccatcaatga
2401 atacaagggt gctgtgatcg ttgtcagcca tgatgcccga ctcatcacag aaaccaattg
2461 ccagctgtgg gtggtggagg agcagagtgt tagccaaatc gatggtgact ttgaagacta
2521 caagcgggag gtgttggagg ccctgggtga agtcatggtc agccggcccc gagagtgaag
2581 ctttccttcc cagaagtctc ccgagagaca tatttgtgtg gcctagaagt cctctgtggt
2641 ctcccctcct ctgaagactg cctctggcct gcagctgacc tggcaaccat tcaggcacat
2701 gaaggtggag tgtgaccttg atgtgaccgg gatcccactc tgattgcatc catttctctg
2761 aaagacttgt ttgttctgct tctcttcata taactgagct ggccttatcc ttggcatccc
2821 cctaaacaaa caagaggtga ccaccttatt gtgaggttcc atccagccaa gtttatgtgg
2881 cctattgtct caggactctc atcactcaga agcctgcctc tgatttaccc tacagcttca
2941 ggcccagctg ccccccagtc tttgggtggt gctgttcttt tctggtggat ttaatgctga
3001 ctcactggta caaacagctg ttgaagctca gagctggagg tgagcttctg aggcctttgc
3061 cattatccag cccaagattt ggtgcctgca gcctcttgtc tggttgagga cttggggcag
3121 gaaaggaatg ctgctgaact tgaatttccc tttacaaggg gaagaaataa aggaaaggag
3181 ttgctgccaa aaaaaaaaaa aaaa
//