LOCUS BC034379 2116 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stomatin (EPB72)-like 1, mRNA (cDNA clone MGC:34477
IMAGE:5185908), complete cds.
ACCESSION BC034379
VERSION BC034379.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2116)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2116)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: f Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543664.
FEATURES Location/Qualifiers
source 1..2116
/db_xref="H-InvDB:HIT000042111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34477 IMAGE:5185908"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2116
/gene="STOML1"
/gene_synonym="hUNC-24"
/gene_synonym="SLP-1"
/gene_synonym="STORP"
/db_xref="GeneID:9399"
/db_xref="HGNC:HGNC:14560"
/db_xref="MIM:608326"
CDS 72..1268
/gene="STOML1"
/gene_synonym="hUNC-24"
/gene_synonym="SLP-1"
/gene_synonym="STORP"
/codon_start=1
/product="stomatin (EPB72)-like 1"
/protein_id="AAH34379.1"
/db_xref="GeneID:9399"
/db_xref="HGNC:HGNC:14560"
/db_xref="MIM:608326"
/translation="MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGA
DVPQSWPSCLCHGLISFLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGP
GMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVK
DLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELA
VEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPP
APQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTT
GRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEA
VLRALK"
BASE COUNT 488 a 585 c 660 g 383 t
ORIGIN
1 gggccgcgta gggcccactg gccagggagg gcgccgcgcg gaggcgcggg gcgtgtctcc
61 tgtcaaaagc catgctcggc aggtctgggt accgggcgct gcccctgggt gattttgacc
121 gcttccagca gtcgagcttc ggctttctgg gctcgcagaa gggctgcttg tccccggagc
181 ggggcggcgt ggggacaggg gccgatgtac cccagagctg gccctcctgc ctctgtcatg
241 gcctcatcag tttcctgggg ttcttgctgc tgttggtcac cttccccatt tctggctggt
301 ttgccctgaa gattgtgccc acctacgagc ggatgattgt gttccgcctg ggccggatcc
361 gcacccccca gggacctggc atggttctgc tcttgccctt cattgactcc tttcagaggg
421 tggatctgag gacacgagcc ttcaacgtcc ctccctgcaa gctggcctct aaggacgggg
481 ctgtgctgtc cgtgggagcc gatgtccagt ttcgcatctg ggacccggtg ctgtcggtga
541 tgactgtgaa agacctgaac acagccacac gcatgacagc ccagaacgcc atgaccaagg
601 ccctgctcaa gaggccgctg cgggagatcc agatggagaa gctcaagatc agcgaccagc
661 ttctgctgga gatcaacgat gtgaccaggg cctgggggct ggaggtagac cgcgtggagc
721 tggcggtgga ggccgtgctc cagccgcccc aggacagccc agctgggccc aacctggaca
781 gcaccctcca gcagctggcc ctgcacttcc tgggaggaag catgaactca atggcaggag
841 gtgccccgtc cccggggcca gcagacaccg tggagatggt gagtgaagtt gagccacctg
901 cccctcaagt tggtgccagg tccagtccga agcagcctct ggcggagggg ctactgactg
961 ctctacagcc cttcctgtct gaggccctgg tcagccaagt cggggcctgc taccagttca
1021 atgtcgtcct gcccagcggc acccaaagcg cctacttcct ggacctcact acaggacgag
1081 gaagagtggg acacggggtg cctgatggca tccctgatgt ggtggtggag atggccgagg
1141 cagacctgcg ggccctgcta tgcagagagc tgcggcccct gggggcctac atgagtggac
1201 ggctgaaggt gaagggcgac ctggctatgg ccatgaagct ggaggctgtc ctcagggcct
1261 tgaagtagca gccttggctg actttccaga gcccagtccc aagcctggca ccaagcctga
1321 ggggcctctt ggaggaggag gtgttcatct gcaccacaga gagttgaggc cctaacaaat
1381 ttcaggccca gccaagagcc catgaatgga ggctgcagga ggctgagtcc ggctgccatg
1441 cacgtctccc ctacagtggt tctctggaca aggctttgtc catcccggtc cccagctgag
1501 tgcccagcgc tgagctgggt gcacggtgtg attccaggag gagagccagg cctgccctgc
1561 cctgctggct tcctgactgg agagacagga cccacagaaa cagcctgaca gcagctggtt
1621 tggtccttgt gtgagggacc aagcatgtgg cccaggctct aagctctgcg gggattggag
1681 agggatgggg agggaaggga aggcagctcc aagaagaggt ccctgtggcg aagttacctg
1741 gggatcctgg ctggcccacc ttcctggctg cagtccaggc ccgtgctggc gggattgggc
1801 atgggaagga gcagggcctg ctgcttccct ggcgctgctc ccaaagattt ctgactcatc
1861 tgccagctcc gtcctgcatg cctggcgagc tggggcccag ggcagcatga aggagagccc
1921 tgcgttctgt gcttcttacc agaggtttgc aagcctcaga caaataaatg tggtgtttac
1981 aatgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaa
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