LOCUS BC034291 1638 bp mRNA linear HUM 09-FEB-2006
DEFINITION Homo sapiens UPF1 regulator of nonsense transcripts homolog
(yeast), mRNA (cDNA clone IMAGE:4775809).
ACCESSION BC034291
VERSION BC034291.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: d Column: 12.
FEATURES Location/Qualifiers
source 1..1638
/db_xref="H-InvDB:HIT000093382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4775809"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
BASE COUNT 361 a 431 c 477 g 369 t
ORIGIN
1 ggccgagcgc cccctgctgg cccgcggcgg cgaggagcag agggagcgga ggaggggccg
61 gcccgcggga gccgcggcca ccaggaggcc ccgctccgtc ccatcggggc tgcggccagg
121 gcggagggag gaagaccctc atctcagagt agccctttcc tctgttcttt tatttctttt
181 tctctttgat tgaaagggga ctacgtctta gcaggaaaaa aaacttcgca tttctgtgcc
241 cgagcaggct ccttgcaaag acagcagcgt gcggggcaga gccccgggag ggcgcgtctg
301 tccacgccta ccggacgcgc cgaggtcgcg ctgcctgtgt tctccgaggg ccttcattta
361 aagaaaataa gggtgttttg ggtttttctc tttgtttttt tcaagattct tttaaaggag
421 tactgaagaa tactttccta agtttgtctc taaaatctta gcggtggacc tgggagattt
481 gagaagcttc cagaaacagt ttaaacaagc cagcgctact ggagaagagg agcaacacct
541 gtgccgcggc cggaggagtt ttgttgttgg ttttagcttc cagtggcttc tttctgcggg
601 gcatcaggct gctggggtag ccgcccgccg agcctggaag ctgctcgttc tccgctggac
661 tcagaagcca agctgcttcc cgcctagact cggcgcaggg ccccgcaccg gtgaggaagg
721 tgcttttggc cccattgcga ggggccttgg ccaggactgg ccctgtggcc aggaggcgag
781 aaggtggctg ttcccggatt gacggctttt tcccgggggc ctttggaaga tttggtggaa
841 ggacaagagg gcctgtccct gtccccgtcc ccaggaggta ccgacagtcc ctgtgctggt
901 tagacacgga gcgctgcaca ccgaaagccc aaattgggag ctctgcctgc cggcaacttt
961 gctgatgggg tgattgctgc ttctgggggg taaggaaaca agttacagaa attaccgcgt
1021 tctgtgtgaa gggactgagg gtgtggtgtc attggcagag ggtcatttta ggagagctgc
1081 cccagcccct cgaacgcctg gcttggggtg tcattctgcc tggcggccag gcctccagct
1141 tcccctgccc cgggcctggg gctgtcactg gccctgatcc gaacacctcc agattccggc
1201 ttctacatgg gacagacggg gacgcacagg ccaccttcct tctggcaggg actcttattt
1261 attcccattg ctctagggct ttcggtttcc ccttcttccg gtaggccgcg tagaggcatg
1321 caccgggtag gtttccgcgg tgaccccgcg gcggcctgag ggacgctccc tgccccatcc
1381 cggctgttgg gctgggccgc tttgcctctg cttcgccctg tgctgtgttc tccagctttg
1441 tagcagcagc cttgacaaac ccaggcgcac tgtaccaagg caatgtaact tttgattttc
1501 ggtcaattta agttcttttg tcaccaaata ttaataaaca gttttgactt caaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaa
//