LOCUS BC034275 1034 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens aspartate beta-hydroxylase domain containing 1, mRNA
(cDNA clone IMAGE:4156741), partial cds.
ACCESSION BC034275
VERSION BC034275.3
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1034)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1034)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034275.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: e Column: 9.
FEATURES Location/Qualifiers
source 1..1034
/db_xref="H-InvDB:HIT000042085"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4156741"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1034
/gene="ASPHD1"
/db_xref="GeneID:253982"
/db_xref="HGNC:HGNC:27380"
CDS <1..792
/gene="ASPHD1"
/codon_start=1
/product="ASPHD1 protein"
/protein_id="AAH34275.2"
/db_xref="GeneID:253982"
/db_xref="HGNC:HGNC:27380"
/translation="SPGGPGDPGEGPRTEGLVSRRLRAYARRYSWAGMGRVRRAAQGG
GPGPGRGPGVLGIQRPGLLFLPDLPSAPFVPRDAQRHDVELLESSFPAILRDFGAVSW
DFSGTTPPPRGWSPPLAPGCYQLLLYQAGRCQPSNCRRCPGAYRALRGLRSFMSANTF
GNAGFSVLLPGARLEGRCGPTNARVRCHLGLKIPPGCELVVGGEPQCWAEGHCLLVDD
SFLHTVAHNGSPEDGPRVVFIVDLWHPNVAGAERQALDFVFAPDP"
BASE COUNT 238 a 296 c 320 g 180 t
ORIGIN
1 agcccagggg gtcctgggga tcccggggaa ggacctagga cggaaggcct agtgagccgg
61 cggcttcggg cctacgcaag gcgctactcc tgggctggga tgggtagagt gaggcgggca
121 gctcagggtg gtggcccagg ccctgggaga gggccagggg tcctaggtat tcagcgccca
181 ggcctgcttt tcctaccaga cctgccttca gccccctttg tgccgcggga cgcccagcgg
241 cacgacgtgg agctcctgga gagcagcttc cctgccattt tgcgggactt cggggctgtg
301 agctgggact tctcagggac tacccctccg cctcggggct ggtccccacc tctggccccc
361 gggtgctacc agctcctgct gtaccaagca ggccggtgcc aacccagcaa ctgccgccgg
421 tgcccggggg cctatcgggc actgaggggg cttcgaagct ttatgagtgc caacaccttc
481 ggcaatgccg gcttttccgt tctcctgcct ggggcccggc tcgagggccg ctgtgggccc
541 accaatgccc gggtcagatg ccatctgggc ctaaagatcc ctcctggctg tgagctggtg
601 gtcggcggtg agccccagtg ctgggctgag gggcactgtc tactggtgga cgactctttt
661 ctacacacag tggctcacaa tggctccccc gaagatgggc ctcgagtggt cttcatcgtg
721 gacctctggc accccaacgt ggcaggggct gagcgccagg ccctcgactt tgtcttcgcc
781 ccagaccctt gaaggaaggt gctcccttca cacacccagg ctggagagac actgcgctca
841 gggacggctt gatggtagcc aggacctcct ctctactgcg ggggtgggcg ggggcggagg
901 atgggaactg gctagtgagc actgaaatat aaattctgaa tcctcaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaa
//