LOCUS BC033859 1638 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 4B, mRNA (cDNA clone
MGC:45387 IMAGE:5173394), complete cds.
ACCESSION BC033859
VERSION BC033859.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40549398.
FEATURES Location/Qualifiers
source 1..1638
/db_xref="H-InvDB:HIT000041997"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45387 IMAGE:5173394"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1638
/gene="CHMP4B"
/gene_synonym="CHMP4A"
/gene_synonym="dJ553F4.4"
/gene_synonym="Shax1"
/gene_synonym="SNF7-2"
/db_xref="GeneID:128866"
/db_xref="HGNC:HGNC:16171"
CDS 110..784
/gene="CHMP4B"
/gene_synonym="CHMP4A"
/gene_synonym="dJ553F4.4"
/gene_synonym="Shax1"
/gene_synonym="SNF7-2"
/codon_start=1
/product="chromatin modifying protein 4B"
/protein_id="AAH33859.1"
/db_xref="GeneID:128866"
/db_xref="HGNC:HGNC:16171"
/translation="MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLE
KKIEQELTAAKKHGTKNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTN
TEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFD
EDELMAELEELEQEELDKNLLEISGPETVPLPNVPSIALPSKPAKKKEEEDDDMKELE
NWAGSM"
BASE COUNT 454 a 364 c 468 g 352 t
ORIGIN
1 ggcggcaggg agcggcggga ctgggagcgg gcgcgggagc cgacccgagc cgagccgagc
61 cgagccgagc cggagcgggc ggcgaaggcc ggcgcggcga gcagcaacca tgtcggtgtt
121 cgggaagctg ttcggggctg gagggggtaa ggccggcaag ggcggcccga ccccccagga
181 ggccatccag cggctgcggg acacggaaga gatgttaagc aagaaacagg agttcctgga
241 gaagaaaatc gagcaggagc tgacggccgc caagaagcac ggcaccaaaa acaagcgcgc
301 ggccctccag gcactgaagc gtaagaagag gtatgagaag cagctggcgc agatcgacgg
361 cacattatca accatcgagt tccagcggga ggccctggag aatgccaaca ccaacaccga
421 ggtgctcaag aacatgggct atgccgccaa ggccatgaag gcggcccatg acaacatgga
481 catcgataaa gttgatgagt taatgcagga cattgctgac cagcaagaac ttgcagagga
541 gatttcaaca gcaatttcga aacctgtagg gtttggagaa gagtttgacg aggatgagct
601 catggcggaa ttagaagaac tagaacagga ggaactagac aagaatttgc tggaaatcag
661 tggacccgaa acagtccctc taccaaatgt tccctctata gccctaccat caaaacccgc
721 caagaagaaa gaagaggagg acgacgacat gaaggaattg gagaactggg ctggatccat
781 gtaatggggt ccagcgctgg ctgggcccag acagactgtg gtggcctgcg cagcgagcag
841 gcgtgtgcgt gtgtggggca ggcaggatgt ggtgcaggca ggttccatcg ctttcgactc
901 tcactccaaa gcagtagggc cgcgttgctg ctcactctct gcatagcatg gtctgcacct
961 gggagatggg cggggggagg ggggcgggcg gggtgggaag tgcctgctgt ttataatgtt
1021 gaatttctgt aaaataaact gtatttgcaa atccaacatt gagcttctgg actacgctga
1081 ctccactgct gaatcctcaa tggaaagggt cgactggttg cagttgaaat gacctgaaat
1141 gtagcctctg tccttgtaag tcagttgact tgccgcacat ctctttgtgt acttgtacgg
1201 tactggcaga aaagtcattt ttcaaaagcc ataggctttt ccttgccctt agctgtaata
1261 atgcatctga ttttgatttc ctccagagct gtgtttctgt ccatcacctg tgtattggcc
1321 ctgtgtttac cactctggcc cactcctcac ccccttgctc ccctggtctt ctggagtttg
1381 tgacattgat ttgaaatgga tggtgttctc ttgagagcaa gtgagattgt tagaattaag
1441 ttccaactat acagttttct aacatagcta taaggtcctt gttgctgttt gtgataactg
1501 atagataact cattggaaac gtgcatacat ttatattcag atgaaattat ggtttgcact
1561 gtctattaaa tatctcgatt aattttcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaa
//