LOCUS BC033808 2096 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens H2.0-like homeobox, mRNA (cDNA clone MGC:44994
IMAGE:5184776), complete cds.
ACCESSION BC033808
VERSION BC033808.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2096)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: l Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923769.
FEATURES Location/Qualifiers
source 1..2096
/db_xref="H-InvDB:HIT000041969"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44994 IMAGE:5184776"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2096
/gene="HLX"
/gene_synonym="HB24"
/db_xref="GeneID:3142"
/db_xref="HGNC:HGNC:4978"
/db_xref="MIM:142995"
CDS 216..1682
/gene="HLX"
/gene_synonym="HB24"
/codon_start=1
/product="H2.0-like homeobox"
/protein_id="AAH33808.1"
/db_xref="GeneID:3142"
/db_xref="HGNC:HGNC:4978"
/db_xref="MIM:142995"
/translation="MFAAGLAPFYASNFSLWSAAYCSSAGPGGCSFPLDPAAVKKPSF
CIADILHAGVGDLGAAPEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVAPS
EVPAGFPQRLSPLSAAYHHHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNP
HHSGSAPAPSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQP
SAGQFFASLDPINEASAILSPLNSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKR
SWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHS
KEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESLDMAPSDTE
RTEGSERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSSASSLSSSSTSAG
CASSLGGGGASELLPATQPTASSAPKSPEPAQGALGCL"
BASE COUNT 448 a 695 c 607 g 346 t
ORIGIN
1 cagggagcga ggcggtgacc ggccgagatc cggccctcgc ctcctccctc ggtggcgcta
61 gggctcccgg cctctcttcc tcagtgcggg cggagaagcg aaagcggatc gtcctcggct
121 gccgccgcct tctccgggac tcgcgcgccc ctccccgcgc gcccacccac ccagtccggc
181 tggactgcgg cagccgcgcg gctcaccccg gcaggatgtt cgcagccggg ctggctccct
241 tctacgcctc caacttcagc ctctggtcgg ccgcttactg ctcctcggcc ggcccaggcg
301 gctgctcctt ccccttggac cccgccgccg tcaaaaagcc ctccttctgc atcgcagaca
361 ttctgcacgc cggcgtgggg gatctggggg cggccccgga gggcctggca ggggcctcgg
421 ccgccgccct caccgcgcac ttgggctcgg ttcacccgca cgcctctttc caagcggcgg
481 ccagatcccc gcttcgaccc accccagtgg tggcgccctc cgaagtcccg gctggcttcc
541 cgcagcggct gtctccgctc tcagccgcct accaccacca tcacccgcaa caacaacagc
601 agcagcaaca gccgcagcag caacagcctc cgcctccgcc ccgggctggc gccctgcagc
661 ccccggcctc ggggacgcga gtggttccga acccccacca cagtggctct gccccggccc
721 cctccagcaa agacctcaaa tttggaattg accgcatttt atctgcagaa tttgacccaa
781 aagtcaaaga aggcaacacg ctgagagatc tcacttccct gctaaccggt gggcggcccg
841 ccggggtgca cctctcaggc ctgcagccct cggccggcca gttcttcgca tctctagatc
901 ccattaacga ggcttctgca atcctgagtc ccttaaactc gaacccaaga aattcagttc
961 agcatcagtt ccaagacacg tttccaggtc cctatgctgt gctcacgaag gacaccatgc
1021 cgcagacgta caaaaggaag cgttcatggt cgcgcgctgt gttctccaac ctgcagagga
1081 aaggcctgga gaaaaggttt gagattcaga agtacgtgac caagccggac cgaaagcagc
1141 tggcggcgat gctgggcctc acggacgcac aggtgaaggt gtggttccag aaccggcgga
1201 tgaagtggcg gcactccaag gaggcccagg cccaaaagga caaggacaag gaggctggcg
1261 agaagccatc aggtggagcc ccggctgcgg atggcgagca ggacgagagg agccccagcc
1321 gttctgaagg cgaggctgag agcgagagca gcgactccga gtccctggac atggccccca
1381 gcgacacgga gcggactgag gggagtgagc gttctctgca ccaaacaaca gttattaagg
1441 ccccggtcac tggcgccctc attaccgcca gcagtgctgg gagtggtggg agcagcggcg
1501 gcggcggcaa tagtttcagc ttcagcagcg ccagcagtct tagtagcagc agcaccagtg
1561 cgggttgcgc cagcagcctt ggcggcggcg gcgcctcgga gcttctccct gcaacacagc
1621 ccacagccag cagcgctccc aaaagccccg agccagccca aggcgcgctt ggctgcttat
1681 agactgtact agggcggagg ggatccgggc cttgcgtgca gcctcccaac catgggctgg
1741 gttttgtgct tactgtatgt tggcgacttg gtagggcagg agacgcagcg tggagcctac
1801 ctcccgacat tcacgcttcg ccccacgctg ctccgactgg ctgcagcgga cactgcccaa
1861 agcagagggg agtctcagtg tcctgctagc cagccgaaca cttctctccg gaagcaggct
1921 ggttcgactg tgaggtgttt gactaaactg tttctctgac tcgccccaga ggtcgtggct
1981 caaaggcact taggacgcct taaatttgta aataaaatgt ttactacggt ttgtaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//