LOCUS BC033803 1640 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens limbic system-associated membrane protein, mRNA (cDNA
clone MGC:45341 IMAGE:5188760), complete cds.
ACCESSION BC033803
VERSION BC033803.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1640)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1640)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45594239.
FEATURES Location/Qualifiers
source 1..1640
/db_xref="H-InvDB:HIT000051144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45341 IMAGE:5188760"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1640
/gene="LSAMP"
/gene_synonym="LAMP"
/db_xref="GeneID:4045"
/db_xref="HGNC:HGNC:6705"
/db_xref="MIM:603241"
CDS 501..1517
/gene="LSAMP"
/gene_synonym="LAMP"
/codon_start=1
/product="limbic system-associated membrane protein"
/protein_id="AAH33803.1"
/db_xref="GeneID:4045"
/db_xref="HGNC:HGNC:6705"
/db_xref="MIM:603241"
/translation="MVRRVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVR
QGDTAILRCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVD
VYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPE
PVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYP
PTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLT
VTNVTEEHYGNYTCVAANKLGVTNASLVLFRPGSVRGINGSISLAVPLWLLAASLLCL
LSKC"
BASE COUNT 477 a 408 c 413 g 342 t
ORIGIN
1 ggggagagag gctctgggtt gctgctgctt ctgctgctgc tgctgctgtg tggctgtttc
61 tgtacactca ctggcaggct tggtgccggc tccctcgccc gcccgcccgc cagcctggga
121 aagtgggtta cagagcgaag gagctcagct cagacactgg cagaggagca tccagtcaca
181 gagagaccaa acaagaaccc tttcctttgg cttcctcttc agctcttcca gagggcttgc
241 tatttgcact ctctcttttg aaattgtgtt gcttttactt ttcacccttc tgcttgggtt
301 ttatgagggc tttgttaagt cttagaggga aaagagactg agcgagggaa agagagaggc
361 aaagtggaaa ggaccataaa ctggcaaagc ccgctctgcg ctcgctgtgg atgaaagccc
421 cgtgttggtg aagcctctcc tcgcgagcag cgcgcacccc tccagagcac cccgcggacc
481 cgcacctcgg cgtggccacc atggtcagga gagttcagcc ggatcggaaa cagttgccac
541 tggtcctact gagattgctc tgccttcttc ccacaggact gcctgttcgc agcgtggatt
601 ttaaccgagg cacggacaac atcaccgtga ggcaggggga cacagccatc ctcaggtgcg
661 ttgtagaaga caagaactca aaggtggcct ggttgaaccg ttctggcatc atttttgctg
721 gacatgacaa gtggtctctg gacccacggg ttgagctgga gaaacgccat tctctggaat
781 acagcctccg aatccagaag gtggatgtct atgatgaggg ttcctacact tgctcagttc
841 agacacagca tgagcccaag acctcccaag tttacttgat cgtacaagtc ccaccaaaga
901 tctccaatat ctcctcggat gtcactgtga atgagggcag caacgtgact ctggtctgca
961 tggccaatgg ccgtcctgaa cctgttatca cctggagaca ccttacacca actggaaggg
1021 aatttgaagg agaagaagaa tatctggaga tccttggcat caccagggag cagtcaggca
1081 aatatgagtg caaagctgcc aacgaggtct cctcggcgga tgtcaaacaa gtcaaggtca
1141 ctgtgaacta tcctcccact atcacagaat ccaagagcaa tgaagccacc acaggacgac
1201 aagcttcact caaatgtgag gcctcggcag tgcctgcacc tgactttgag tggtaccggg
1261 atgacactag gataaatagt gccaatggcc ttgagattaa gagcacggag ggccagtctt
1321 ccctgacggt gaccaacgtc actgaggagc actacggcaa ctacacctgt gtggctgcca
1381 acaagctggg ggtcaccaat gccagcctag tccttttcag acctgggtcg gtgagaggaa
1441 taaatggatc catcagtctg gccgtaccac tgtggctgct ggcagcatct ctgctctgcc
1501 ttctcagcaa atgttaatag aataaaaatt taaaaataaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa
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