LOCUS BC033711 1373 bp mRNA linear HUM 17-AUG-2004
DEFINITION Homo sapiens ataxin 3, mRNA (cDNA clone MGC:44934 IMAGE:4393766),
complete cds.
ACCESSION BC033711
VERSION BC033711.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1373)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1373)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13518018.
FEATURES Location/Qualifiers
source 1..1373
/db_xref="H-InvDB:HIT000041913"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44934 IMAGE:4393766"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1373
/gene="ATXN3"
/gene_synonym="ATX3"
/gene_synonym="MJD"
/gene_synonym="MJD1"
/gene_synonym="SCA3"
/db_xref="GeneID:4287"
/db_xref="MIM:607047"
CDS 13..1125
/gene="ATXN3"
/gene_synonym="ATX3"
/gene_synonym="MJD"
/gene_synonym="MJD1"
/gene_synonym="SCA3"
/codon_start=1
/product="ATXN3 protein"
/protein_id="AAH33711.1"
/db_xref="GeneID:4287"
/db_xref="MIM:607047"
/translation="MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEE
RMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRL
RIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGY
SIFVVKGDLPDCEADQLLQMIRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDG
SGMLDEDEEDLQRALALSRQEIDMEDEEADLRRAIQLSMQGSSRNISQDMTQTSGTNL
TSEELRKRREAYFEKQQQKQQQQQQQQQQQQQQQQQQQGDLSGQSSHPCERPATSSGA
LGSDLGDAMSEEDMLQAAVTMSLETVRNDLKTEGKK"
BASE COUNT 477 a 245 c 318 g 333 t
ORIGIN
1 ccacgcgtcc gcatggagtc catcttccac gagaaacaag aaggctcact ttgtgctcaa
61 cattgcctga ataacttatt gcaaggagaa tattttagcc ccgtggaatt atcctcaatt
121 gcacatcagc tggatgagga ggagaggatg agaatggcag aaggaggagt tactagtgaa
181 gattatcgca cgtttttaca gcagccttct ggaaatatgg atgacagtgg ttttttctct
241 attcaggtta taagcaatgc cttgaaagtt tggggtttag aactaatcct gttcaacagt
301 ccagagtatc agaggctcag gatcgatcct ataaatgaaa gatcatttat atgcaattat
361 aaggaacact ggtttacagt tagaaaatta ggaaaacagt ggtttaactt gaattctctc
421 ttgacgggtc cagaattaat atcagataca tatcttgcac ttttcttggc tcaattacaa
481 caggaaggtt attctatatt tgtcgttaag ggtgatctgc cagattgcga agctgaccaa
541 ctcctgcaga tgattagggt ccaacagatg catcgaccaa aacttattgg agaagaatta
601 gcacaactaa aagagcaaag agtccataaa acagacctgg aacgagtgtt agaagcaaat
661 gatggctcag gaatgttaga cgaagatgag gaggatttgc agagggctct ggcactaagt
721 cgccaagaaa ttgacatgga agatgaggaa gcagatctcc gcagggctat tcagctaagt
781 atgcaaggta gttccagaaa catatctcaa gatatgacac agacatcagg tacaaatctt
841 acttcagaag agcttcggaa gagacgagaa gcctactttg aaaaacagca gcaaaagcag
901 caacagcagc agcagcagca gcagcagcag cagcagcagc agcagcagca gcagggggac
961 ctatcaggac agagttcaca tccatgtgaa aggccagcca ccagttcagg agcacttggg
1021 agtgatctag gtgatgctat gagtgaagaa gacatgcttc aggcagctgt gaccatgtct
1081 ttagaaactg tcagaaatga tttgaaaaca gaaggaaaaa aataatacct ttaaaaaata
1141 atttagatat tcatactttc caacattatc ctgtgtgatt acagcatagg gtccactttg
1201 gtaatgtgtc aaagagatga ggaaataaga cttttagcgg tttgcaaaca aaatgatggg
1261 aaagtggaac aatgcgtcgg ttgtaggact aaataatgat cttccaaata ttagccaaag
1321 aggcattcag caattaaaga catttaaaat agttttctaa aaaaaaaaaa aaa
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