LOCUS BC033502 868 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens signal-regulatory protein delta, mRNA (cDNA clone
MGC:35245 IMAGE:5172531), complete cds.
ACCESSION BC033502
VERSION BC033502.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 868)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 868)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30425381.
FEATURES Location/Qualifiers
source 1..868
/db_xref="H-InvDB:HIT000051126"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35245 IMAGE:5172531"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..868
/gene="SIRPD"
/gene_synonym="dJ576H24.4"
/db_xref="GeneID:128646"
/db_xref="HGNC:HGNC:16248"
CDS 45..638
/gene="SIRPD"
/gene_synonym="dJ576H24.4"
/codon_start=1
/product="signal-regulatory protein delta"
/protein_id="AAH33502.1"
/db_xref="GeneID:128646"
/db_xref="HGNC:HGNC:16248"
/translation="MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQQTEMSQTVSTG
ESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFST
RIREISLADAGTYYCVKFIKGRAIKEYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAH
HDAHTCLSALPERNSTNYFVQPCCCLRLLGLTGLLSK"
BASE COUNT 281 a 231 c 170 g 186 t
ORIGIN
1 ccaggacagg cattcaggca gagcaagctc caggtttcac cacaatgccc atccctgcct
61 ccccactcca cccacctctg ccttccttac tgctgtatct gctgcttgaa ctggcaggag
121 tcacacatgt gttccatgtg caacaaacgg agatgtcaca gactgtatca actggggagt
181 caatcatctt gagttgcagc gtacccgata ccttaccaaa tggacctgtc ttgtggttca
241 agggaacagg gccaaaccgg aaattaatct acaatttcaa acaaggtaac tttcccagag
301 taaaagagat tggagacacc accaagcctg gcaacacaga cttttccacc cgcatccgtg
361 aaatctctct tgctgatgct ggcacctatt actgcgtgaa gttcataaaa ggaagagcta
421 tcaaggagta ccaatcaggt cggggcactc aggtgtttgt tactgagcag aatccaagac
481 ctcccaagaa cagacctgca ggcagagcag gctccagggc ccaccatgat gcccatacct
541 gcctctcggc cctgcctgag agaaacagca caaactattt cgtccaaccc tgctgctgcc
601 tccggctgct gggactcaca ggcttgctgt caaaataatc caaacaggga aggaacgtac
661 aagtaaataa caaaagcccc catactcttc tgactccctg gagacagcta ctttttagga
721 gtttcatttg ccttcttcaa gagagctttc ttccactgac ataaaatgcc agcttgatcg
781 tacaataaat ctgtctattt acctgggtcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//