LOCUS BC033499 2252 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 116, mRNA (cDNA clone
MGC:35219 IMAGE:5172053), complete cds.
ACCESSION BC033499
VERSION BC033499.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2252)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2252)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29501808.
FEATURES Location/Qualifiers
source 1..2252
/db_xref="H-InvDB:HIT000051125"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35219 IMAGE:5172053"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2252
/gene="CCDC116"
/gene_synonym="FLJ36046"
/db_xref="GeneID:164592"
/db_xref="HGNC:HGNC:26688"
CDS 94..1935
/gene="CCDC116"
/gene_synonym="FLJ36046"
/codon_start=1
/product="coiled-coil domain containing 116"
/protein_id="AAH33499.1"
/db_xref="GeneID:164592"
/db_xref="HGNC:HGNC:26688"
/translation="MARCRHHSGYLADDEASHSMCSARVQLPKKPLVPEMRPACKPGR
VPHPPSTCGSSALQGQRRNKRHPQPFGHFLDFLTESQVLDSLETVVEKATERMAAMKT
EAGVPLVEVQDPVEVPSGGRRAHARPSLSTVHRHRVRPTLCTGHPNNYPSSSSSMSNC
HSSLMAGCLGSHSRDSDLGAQGSLPPVRDKLLLEKNLKRLLQLEREGKGLSQSCSQRD
SLLWDSLGSQTSFQWTQEQPLSWFSGLLGSSSGVPEASEPRPGEQEPIFRKREFNKEI
KSLLSQLESLDLPGYCPLREPHRTLNFLADHRLFPALQSVVSQAVDKLRGAHCRDGRP
LFPTSLEPTSDLPPLGSEPAKPTNGGQPYASPRPTVSSPKMLQRKRKDRGGSPSMSSA
QVATRFKLKSPCSSSRFTKKKPLPSISSKSSMSHFSNRLYEELADFLTQQAASLVIRK
YEFEKDLSKQLGFFSFPITHVLRDLSLGLKKVKGSRIHLSSETHRSCLLRKLEESKRA
RQASRLSTSHCSTETPSVQQEPATHTAQDQATEPCRSLYTNLPASRQLSPLEPKLYMS
ACTGMGSSPPKSKDMDNEGRDKAEIEDEDEDEFKDEDQDEDKDEDGV"
BASE COUNT 543 a 723 c 618 g 368 t
ORIGIN
1 ctggcctgtg cggagcaagg cggtgtttct gagaggaatg cgcagctgaa gagagaggtg
61 ggcagcaggc ccggtcacct gccaggtgac cacatggcca ggtgccgcca ccactcgggt
121 tacctggccg atgacgaggc cagccactcc atgtgcagtg cacgggtgca gctgcccaag
181 aagccactgg tcccagaaat gcggccagcc tgcaagccgg gccgtgtgcc acacccacca
241 tccacatgtg gcagctcagc actccagggc caacgccgaa acaagaggca ccctcagccc
301 tttggccact ttctggattt cctaactgag agccaggtcc tggacagcct ggagacagtg
361 gtggagaagg cgactgagcg catggctgcc atgaagacgg aggctggggt gccgcttgtg
421 gaggtgcagg acccagtgga ggtgccaagt ggtggacggc gggcacatgc ccggcccagc
481 ctcagcaccg tacaccggca ccgtgtacgg ccgaccctct gcactggaca ccccaacaac
541 tacccatcca gctccagctc catgtccaac tgccatagca gcctcatggc cggctgtctg
601 ggctcccaca gccgggacag tgacctaggt gcccaaggct cattgccacc tgtgagggac
661 aaactcctgc tggagaagaa cctcaagcgg ctgctacagc tggagaggga agggaaaggc
721 ctcagtcagt cctgctccca gagggactcc ctgctgtggg attcgctggg tagccagacc
781 agctttcagt ggacacagga gcagcccttg tcctggttct cagggctgct gggctcaagc
841 tctggcgtgc ctgaagcatc agagccgagg cctggagaac aggagccaat cttccgcaag
901 cgagagttca ataaggagat caagtcatta ctgagccagc tggagtccct cgacctgcct
961 ggctactgtc cgctccgtga gccccatcgc acgctgaact tcctggctga ccaccgcctc
1021 ttccctgccc tgcaaagcgt ggtcagccag gctgtggata agctccgtgg cgcccactgc
1081 cgcgacggcc gtcctctgtt ccccaccagc ttggagccca cctcagatct gccgcctctg
1141 ggctctgagc cagctaaacc caccaatggc gggcagccct atgcttcccc ccgccccaca
1201 gtctccagcc ccaagatgct tcagagaaaa cgcaaggaca gaggaggctc cccctccatg
1261 tctagtgccc aggtggccac cagattcaaa ctcaagagcc cctgcagcag cagcaggttc
1321 acgaagaaga agccgctgcc ctccatctcg tcgaagtcca gcatgtctca cttctccaac
1381 cgcctttatg aggagctcgc cgacttcctg acccagcagg cagcctcctt ggtcatccgc
1441 aagtacgagt tcgaaaagga cctcagtaag cagctgggct tcttctcctt ccccatcacc
1501 cacgtgctca gggacctttc cctgggctta aagaaggtaa aaggctcccg catccacctg
1561 tcctcggaga cccaccggag ctgcctgctg cgtaaactgg aggagtccaa aagggcccgg
1621 caggcctccc ggctcagcac ctcccactgc agcacagaga caccctctgt gcagcaggaa
1681 ccagccaccc acactgccca ggaccaggcc acagagccct gccgctccct ctacaccaac
1741 ttgccagcca gccggcagct cagccctttg gagcccaagc tctacatgtc tgcctgcacc
1801 ggcatgggtt ccagtccccc caagtccaag gacatggaca atgagggccg tgataaagcc
1861 gagattgaag atgaagatga ggatgagttc aaggatgaag accaggatga ggacaaggat
1921 gaggatggag tctagagcct cccagagcct ggagaggagg cctcggtcag ccactccgtg
1981 gacgtgggcc acggtgaccc accatgaagt ccccactagc cactcgattc cctgctctgt
2041 cagagttgct gcacatcaca ccagcccctg ccaagagcag gagtcaccac aggctgaatg
2101 cccacgagga gctctgctga gactctcaag ggagccagtg aaagaaatag aaataaagcc
2161 tgtgttgctg ggacacaggt ttgctgtcct gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//