LOCUS BC033322 1089 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens RAB25, member RAS oncogene family, mRNA (cDNA clone
MGC:30083 IMAGE:4775725), complete cds.
ACCESSION BC033322
VERSION BC033322.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1089)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1089)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: e Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1089
/db_xref="H-InvDB:HIT000051111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:30083 IMAGE:4775725"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1089
/gene="RAB25"
/gene_synonym="CATX-8"
/db_xref="GeneID:57111"
/db_xref="HGNC:HGNC:18238"
CDS 217..858
/gene="RAB25"
/gene_synonym="CATX-8"
/codon_start=1
/product="RAB25, member RAS oncogene family"
/protein_id="AAH33322.1"
/db_xref="GeneID:57111"
/db_xref="HGNC:HGNC:18238"
/translation="MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTT
IGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAV
VERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDST
NVELAFETVLKEIFAKVSKQRQNSIRTNAITLGSAQAGQEPGPGEKRACCISL"
BASE COUNT 251 a 327 c 278 g 233 t
ORIGIN
1 cgacagcacc cccacctgcc agagctgatc ctccctaggc cctgcctaac cttgagttgg
61 cccccaatcc ctctggctgc agaagtcccc ttacccccaa tgagaggagg ggcaggacca
121 gatcttttga gagctgaggg ttgagggcat tgagccaaca cacagatttg tcgcctctgt
181 ccccgaagac acctgcaccc tccatgcgga gccaagatgg ggaatggaac tgaggaagat
241 tataactttg tcttcaaggt ggtgctgatc ggcgaatcag gtgtggggaa gaccaatcta
301 ctctcccgat tcacgcgcaa tgagttcagc cacgacagcc gcaccaccat cggggttgag
361 ttctccaccc gcactgtgat gttgggcacc gctgctgtca aggctcagat ctgggacaca
421 gctggcctgg agcggtaccg agccatcacc tcggcgtact atcgtggtgc agtgggggcc
481 ctcctggtgt ttgacctaac caagcaccag acctatgctg tggtggagcg atggctgaag
541 gagctctatg accatgctga agccacgatc gtcgtcatgc tcgtgggtaa caaaagtgac
601 ctcagccagg cccgggaagt gcccactgag gaggcccgaa tgttcgctga aaacaatgga
661 ctgctcttcc tggagacctc agccctggac tctaccaatg ttgagctagc ctttgagact
721 gtcctgaaag aaatctttgc gaaggtgtcc aagcagagac agaacagcat ccggaccaat
781 gccatcactc tgggcagtgc ccaggctgga caggagcctg gccctgggga gaagagggcc
841 tgttgcatca gcctctgacc ttggccagca ccacctgccc ccactggctt tttggtgccc
901 cttgtcccca cttcagcccc aggacctttc cttgcccttt ggttccagat atcagactgt
961 tccctgttca cagcaccctc agggtcttaa ggtcttcatg ccctatcaca aatacctctt
1021 ttatctgtcc acccctcaca gactaggacc ctcaaataaa gctgttttat atcaaaaaaa
1081 aaaaaaaaa
//