LOCUS BC033180 2070 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens E2F transcription factor 4, p107/p130-binding, mRNA
(cDNA clone MGC:45817 IMAGE:4585569), complete cds.
ACCESSION BC033180
VERSION BC033180.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2070)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2070)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: f Column: 15.
FEATURES Location/Qualifiers
source 1..2070
/db_xref="H-InvDB:HIT000041829"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45817 IMAGE:4585569"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2070
/gene="E2F4"
/gene_synonym="E2F-4"
/db_xref="GeneID:1874"
/db_xref="HGNC:HGNC:3118"
/db_xref="MIM:600659"
CDS 17..1258
/gene="E2F4"
/gene_synonym="E2F-4"
/codon_start=1
/product="E2F transcription factor 4, p107/p130-binding"
/protein_id="AAH33180.1"
/db_xref="GeneID:1874"
/db_xref="HGNC:HGNC:3118"
/db_xref="MIM:600659"
/translation="MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLK
LAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKA
EIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCFAGDTLLAIRAP
SGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQS
PSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEITVSGGPGT
DSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTS
FEPIKADPTGVLELPKELSEIFDPTRECMSSELLEELMSSEVFAPLLRLSPPPGDHDY
IYNLDESEGVCDLFDVPVLNL"
BASE COUNT 462 a 629 c 553 g 426 t
ORIGIN
1 gcggcgggcg ggcgcgatgg cggaggccgg gccacaggcg ccgccgcccc cgggcactcc
61 aagccggcac gaaaagagcc tgggactgct caccaccaag ttcgtgtccc ttctgcagga
121 ggccaaggac ggcgtgcttg acctcaagct ggcagctgac accctagctg tacgccagaa
181 gcggcggatt tacgacatta ccaatgtttt ggaaggtatc gggctaatcg agaaaaagtc
241 caagaacagc atccagtgga agggtgtggg gcctggctgc aatacccggg agattgctga
301 caaactgatt gagctcaagg cagagatcga ggagctgcag cagcgggagc aagaactaga
361 ccagcacaag gtgtgggtgc agcagagcat ccggaacgtc acagaggacg tgcagaacag
421 ctgtttggcc tacgtcactc atgaggacat ctgcagatgc tttgctggag ataccctctt
481 ggccatccgg gccccatcag gcaccagcct ggaggtgccc atcccagagg gtctcaatgg
541 gcagaagaag taccagattc acctgaagag tgtgagtggt cccattgagg ttctgctggt
601 gaacaaggag gcatggagct caccccctgt ggctgtgcct gtgccaccac ctgaagattt
661 gctccagagc ccatctgctg tttctacacc tccacctctg cccaagcctg ccctagccca
721 gtcccaggaa gcctcacgtc caaatagtcc tcagctcact cccactgctg tccctggcag
781 tgcagaagtc cagggaatgg ctggcccagc agctgagatc acagtgagtg gcggccctgg
841 gactgatagc aaggacagtg gtgagctcag ttcactccca ctgggcccaa caacactgga
901 cacccggcca ctgcagtctt ctgccctgct ggacagcagc agcagcagca gcagcagcag
961 cagcagcagc agcaacagta acagcagcag ttcgtccgga cccaaccctt ctacctcctt
1021 tgagcccatc aaggcagacc ccacaggtgt tttggaactc cccaaagagc tgtcagaaat
1081 ctttgatccc acacgagagt gcatgagctc ggagctgctg gaggagttga tgtcctcaga
1141 agtgtttgcc cctctgcttc gtctttctcc acccccggga gaccacgatt atatctacaa
1201 cctggacgag agtgaaggtg tctgtgacct ctttgatgtg cctgttctca acctctgact
1261 gacagggaca tgccctgtgt ggctgggacc cagactgtct gacctggggg ttgcctgggg
1321 acctctccca cccgacccct acagagcttg agagccacag acgcctggct tctccggcct
1381 cccctcaccg cacagttctg gccacagctc ccgctccttc ctggcacttc tgtgctcgca
1441 gagcagggga acaggactca gcccccatca ccgtggagcc aaagtgtttg cttctccctt
1501 tctgcggcct tcgccagccc aggctcggct gccacccagt ggcacagaac cgaggagctg
1561 ccattacccc ccataggggg cagtgtcttg ttcctgccag cctcagtgtc ttgcttctgc
1621 cagctccttc ccctaggagg gaagggtggg gtggaactgg gcacatgcca gcaccacttc
1681 tagcttcctt cgctatcccc caccccctga ccctccagct cctcctggcc ctctcacgtg
1741 cccacttctg ctgggccttt agccctagaa cctgcaggtg gtgggggcgg ctaccaagaa
1801 ggaacagagg tctctgggga ggagtctggg tggtccagcc ctgatgattg gccccacctc
1861 ctgctgcccc ataaccctct cttcatttcg gctttttcat ttaccctcat ttagagccat
1921 ttgcagagat ttagaaagat ttacagtaac gaatggattc ctatataaag attattttta
1981 tactttttgc agcaaaagga aattgtaata tttgtacagt gttcaagtga ataaaaacca
2041 tgcctaaggc taaaaaaaaa aaaaaaaaaa
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