LOCUS BC033163 1489 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens AT rich interactive domain 3A (BRIGHT-like), mRNA
(cDNA clone IMAGE:4543089), partial cds.
ACCESSION BC033163
VERSION BC033163.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1489)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: e Column: 1.
FEATURES Location/Qualifiers
source 1..1489
/db_xref="H-InvDB:HIT000092961"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4543089"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1489
/gene="ARID3A"
/gene_synonym="BRIGHT"
/gene_synonym="DRIL3"
/gene_synonym="E2FBP1"
/db_xref="GeneID:1820"
/db_xref="HGNC:HGNC:3031"
/db_xref="MIM:603265"
CDS <1..1332
/gene="ARID3A"
/gene_synonym="BRIGHT"
/gene_synonym="DRIL3"
/gene_synonym="E2FBP1"
/codon_start=1
/product="ARID3A protein"
/protein_id="AAH33163.1"
/db_xref="GeneID:1820"
/db_xref="HGNC:HGNC:3031"
/db_xref="MIM:603265"
/translation="EEEEDEEGLGPPGPASLGTTALFPRKAQPPQAFRGDGVPRVLGG
QERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPKRKEFLDDLFSFM
QKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSA
AFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYSPGGAHG
MLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQ
AAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQNFLA
MAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPAPT
PTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP"
BASE COUNT 331 a 500 c 457 g 201 t
ORIGIN
1 gaggaggagg aggacgagga ggggctgggc cccccaggcc ctgccagctt gggcaccacg
61 gcactgttcc cccgaaaggc ccagccaccc caggccttcc gcggcgatgg cgttcccagg
121 gtgctggggg gccaggagcg gccggggcct ggccctgccc accccggagg ggccgcccac
181 gtagccccgc agctgcagcc gcctgaccac ggcgactgga cttacgagga gcagtttaag
241 cagctctacg aactcgacgg ggaccccaag aggaaggaat tcctggatga cttgttcagc
301 ttcatgcaga agcgagggac acctgtgaac cgcatcccca tcatggccaa acaggtcctt
361 gacctgttca tgctgtacgt gctggtgacg gagaagggcg gcctcgtgga ggtcatcaac
421 aagaagctgt ggcgtgagat caccaagggc ctcaacctgc ccacgtccat caccagtgca
481 gccttcaccc tgcggaccca atacatgaag tacctgtacc cctacgagtg tgagaagcgg
541 ggcctcagta accccaatga gctccaggca gccatagaca gcaaccgacg ggagggccgg
601 cgccagagct ttggtggctc cctctttgcc tactcgccag gcggggcaca cggcatgctc
661 tcctcaccca agctacccgt gtcctccctg ggcctggccg caagcaccaa cggcagctcc
721 atcacccccg cccctaagat caagaaagag gaggactcag ccatccccat cacagtccct
781 ggccgcctgc ctgtgtccct ggcgggccac cctgtggtgg cagcccaggc agcagctgtg
841 caagcagcag ccgcccaagc agctgtggct gcacaggcag ctgccctgga acagctgcgg
901 gagaagctgg agtctgcaga gcctccggag aagaagatgg ccctggtggc cgatgagcag
961 caacggctga tgcaacgtgc actccagcag aacttcctgg ccatggcggc ccagctgccc
1021 atgagcattc ggatcaacag ccaagcctcc gaaagccgcc aggactctgc tgtgaacctg
1081 acgggcacca acggcagcaa cagcatcagc atgtcggtgg agatcaacgg catcatgtac
1141 acaggagttc tgtttgctca gccgccggcc cccacgccaa cctctgctcc caacaaaggg
1201 ggcggcggcg gcggcagcag cagcagcaac gcaggcggcc ggggaggaaa caccggaacc
1261 agcggcggcc aggctgggcc agcggggctg tccacaccct ccacatctac ctcaaataac
1321 tcgttgcctt aaccgcatca ctccccaccc gccacccacc ctggagcccg ccggcctggg
1381 cagggggtcc aggtgggcca cacaggggcc aggatggcgg aagatacggg tggggaggga
1441 agatatccag aaaggagcca cagctgacgc caaaaaaaaa aaaaaaaaa
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