LOCUS BC033143 1679 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 172, mRNA (cDNA clone
MGC:45763 IMAGE:3960220), complete cds.
ACCESSION BC033143
VERSION BC033143.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1679)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1679)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: c Column: 17.
FEATURES Location/Qualifiers
source 1..1679
/db_xref="H-InvDB:HIT000041814"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45763 IMAGE:3960220"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1679
/gene="C1orf172"
/gene_synonym="FLJ34633"
/gene_synonym="RP11-344H11.3"
/db_xref="GeneID:126695"
CDS 387..1121
/gene="C1orf172"
/gene_synonym="FLJ34633"
/gene_synonym="RP11-344H11.3"
/codon_start=1
/product="C1orf172 protein"
/protein_id="AAH33143.1"
/db_xref="GeneID:126695"
/translation="MGSSFSYPDVKLKGIPVYPYPRATSPAPDADSCCKEPLADPPPM
RHSLPSTFASSPRGSEEYYSFHESDLDLPEMGSGSMSSREIDVLIFKKLTELFSVHQI
DELAKCTSDTVFLEKTSKISDLISSITQDYHLDEQDAEGRLVRGIIRISTRKSRARPQ
TSEGRSTRAAAPTAAAPDSGHETMVGSGLSQDELTVQISQETTADAIARKLRPYGAPG
YPASHDSSFQGTDTDSSGAPLLQVYC"
BASE COUNT 385 a 513 c 443 g 338 t
ORIGIN
1 gtctggagac atatgataaa ccacctcagc ccccaccaag ccgccgcacc cgtagaccag
61 accccaagga ccctggccac catgggccag agagcattac cttcatctct ggctctgctg
121 agccggccct tgagtccccc acctgctgcc tgctctggcg accctgggtg tgggagtggt
181 gccgggctgc cttctgcttc cgccgctgcc gggattgcct ccagcgctgt ggagcctgtg
241 tgcggggatg cagcccctgc ctgtctactg aggactccac tgaggggact gctgaagcca
301 actgggccaa ggagcacaat ggagtgcccc ccagccctga tcgtgcaccc cccagccggc
361 gggatggcca gcggctcaag tcaaccatgg gcagcagctt cagctacccc gatgttaagc
421 tcaaaggcat ccctgtgtat ccctacccga gggccacctc cccagcccct gatgcggact
481 cctgctgcaa ggagccactg gccgatcccc cacccatgcg acacagcctg cccagcacct
541 ttgccagtag tcctcgtggc tccgaggagt actattcttt ccatgagtcg gacctggacc
601 tgccggagat gggcagtggc tccatgtcga gccgagaaat tgatgtgctc atcttcaaga
661 agctgacaga gctgttcagc gtacaccaga tcgatgagct ggccaagtgc acatcagaca
721 ctgtgttcct ggagaagacc agtaagatct cggaccttat cagcagcatc acgcaggact
781 accacctgga tgagcaggat gctgagggcc gcctggtacg cggcatcatt cgcattagta
841 cccgaaagag ccgtgctcgc ccacagacct cggagggtcg ttcaactcgg gctgctgccc
901 caaccgctgc tgcccctgac agtggccatg agaccatggt gggctcaggt ctcagccagg
961 atgagctgac agtgcagatc tcccaggaga cgactgcaga tgccatcgcc cggaagctga
1021 ggccttatgg agctccaggg tacccagcaa gccatgactc atccttccag ggcaccgaca
1081 cagactcgtc gggggcaccc ttgctccagg tgtactgcta acccctgcca ggcccagctg
1141 ccacaccctt tctgggagaa gcatggccta cagaatgaag agggggacca ggaacccctg
1201 tgggagaggc ttagacctga agcagtgccc actctggctc ctcctgcctt ggctgactgg
1261 gttcctggac catgtgcatt tcactgggcc atgggatcta catctccttg catccccagc
1321 tggtctgatc cctgccaggg ccccttcctt cctgctcatg gtcttcaggt ggcctgatca
1381 tggaaagtaa ggagttaggc attaccttct gggagtgaac cctgactcca tccccctatt
1441 gccaccctaa ccaatcatgc aaacttctcc ctccctgggg taattcaaca gttaaaagaa
1501 gcttatctta aatgtattgt attggggggt gggcagggcc cactctatgt tatgttaagg
1561 agttggttct ggttcttggc tgatgttctg tatcttaaca tgaccacagt ttgtaagtac
1621 aaaggtaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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