LOCUS BC033099 2078 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 3 family, member B1, mRNA (cDNA
clone MGC:45675 IMAGE:5446816), complete cds.
ACCESSION BC033099
VERSION BC033099.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2078)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2078)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4502042.
FEATURES Location/Qualifiers
source 1..2078
/db_xref="H-InvDB:HIT000041800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45675 IMAGE:5446816"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2078
/gene="ALDH3B1"
/gene_synonym="ALDH4"
/db_xref="GeneID:221"
/db_xref="HGNC:HGNC:410"
/db_xref="MIM:600466"
CDS 28..1323
/gene="ALDH3B1"
/gene_synonym="ALDH4"
/codon_start=1
/product="aldehyde dehydrogenase 3 family, member B1"
/protein_id="AAH33099.1"
/db_xref="GeneID:221"
/db_xref="HGNC:HGNC:410"
/db_xref="MIM:600466"
/translation="MDPLGDTLRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLL
HDALAQDLHKATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVGALAAGNCVVLKP
SEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFTGSPRVGKIVM
TAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSPE
MQERLLPALQSTITRFYGDDPQSSPNLGRIINQKQFQRLRALLGCGRVAIGGQSDESD
RYIAPTVLVDVQEMEPVMQEEIFGPILPIVNVQSLDEAIEFINRREKPLALYAFSNSS
QVVKRVLTQTSSGGFCGNDGFMHMTLASLPFGGVGASGMGRYHGKFSFDTFSHHRACL
LRSPGMEKLNALRYPPQSPRRLRMLLVAMEAQGCSCTLL"
BASE COUNT 417 a 667 c 628 g 366 t
ORIGIN
1 ggaagggcag cttggcagag cctcaggatg gacccccttg gggacacgct gcggcgactg
61 cgggaggcct tccacgcggg gcgcacgcgg ccagctgagt tccgggctgc gcagctccaa
121 ggcctgggcc gcttcctgca agaaaacaag cagcttctgc acgacgcact ggcccaggac
181 ctgcacaagg ccacgcagct ggactccgcc ttcatccgga aggagccctt tggcctggtc
241 ctcatcattg cgccctggaa ctatccgctg aacctgacgc tggtgcccct cgtgggagcc
301 ctcgctgcag ggaactgtgt ggtgctgaag ccatcggaga ttagcaagaa cgtcgagaag
361 atcctggccg aggtgctgcc ccaatacgtg gaccagagct gctttgctgt ggtgctgggc
421 gggccccagg agacggggca gctgctagag cacaggttcg actacatctt cttcacaggg
481 agccctcgtg tgggcaagat tgttatgact gctgccgcca agcacctgac acctgtcacc
541 ctggagctgg ggggcaagaa cccttgctac gtggacgaca actgcgaccc ccagaccgtg
601 gccaaccgcg tggcctggtt ccgctacttc aacgccggcc agacctgcgt ggcccccgac
661 tacgtcctat gcagccctga gatgcaggag aggctgctgc ctgccctgca gagcaccatc
721 acccgtttct atggcgacga cccccagagc tccccaaacc tgggccgcat catcaaccag
781 aaacagttcc agcggctgcg ggcattgctg ggctgcggcc gtgtggccat tgggggccag
841 agcgatgaga gcgatcgcta catcgccccc acggtgctgg tggatgtgca ggagatggag
901 cctgtgatgc aggaggagat cttcgggccc atcctgccca tcgtgaacgt gcagagcttg
961 gacgaggcca tcgagttcat caaccggcgg gagaagcccc tggccctgta cgccttctcc
1021 aacagcagcc aggtggtcaa gcgggtgctg acccagacca gcagcggggg cttctgtggg
1081 aacgacggct tcatgcacat gaccctggcc agcctgcctt ttggaggagt gggtgccagt
1141 gggatgggcc ggtaccatgg caagttctcc ttcgacacct tctcccacca tcgcgcctgc
1201 ctcctgcgca gcccggggat ggagaagctc aacgccctcc gctacccgcc gcaatcgccg
1261 cgccgcctga ggatgctgct ggtggccatg gaggcccaag gctgcagctg cacactgctc
1321 tgagcccttc cccaggccca ggctgtagac caccatgaca gctgtcgcct gcggctggtg
1381 gagacggggc ctgggctccc gggcccgagg aggaaaagga ttgccaaggc tccagggcac
1441 ccctcaaagc agcgcctgcc tcctccctcc tgggtcttcc ctctccctgc ctcagcctcc
1501 tccctcagcc gctcccaacc atgagagccg aggtgggagg catgggaaac agtgcagtga
1561 ctcaccccct gcccccgcac caaccaccca tattcaggag aagaggacag acacggcacc
1621 tctgagtcac ccctctcctg tggagcgggc gtccgagggg ccctggcatc tgactcaggc
1681 cacaccatgg aatcactgca tccaaggcca ttcctgccct ctctgagtct cagtttttcc
1741 atttgttcag tggagagaat taaccattga tacctcctgg ctgggtgagg cggctcacac
1801 ctgtaatccc agcactttgg gaggccgagg caggcggatc acctgaaatc aggagttcaa
1861 gatcagcctg gctaacatgg cgaaaccccg tctctactaa aaatacaaaa attagcctgg
1921 cgtggtggcg catgcctgta atcccagcta ctcaggaggc taaggcagga gaatcgcttg
1981 aacccgggag gtggaggttg ccgtgagctg agattgcgtc actgaactcc ggcctgggtg
2041 acagaaggag gctctgcctt aaaaaaaaaa aaaaaaaa
//