LOCUS BC033064 1070 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:45598
IMAGE:3926854), complete cds.
ACCESSION BC033064
VERSION BC033064.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1070)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1070)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31880337.
FEATURES Location/Qualifiers
source 1..1070
/db_xref="H-InvDB:HIT000041779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45598 IMAGE:3926854"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1070
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 77..1054
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="TUBA1C protein"
/protein_id="AAH33064.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIHKFDLMYAKRAFVHFPLATYAPVISAEKAYHEQLTVAE
ITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCP
TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLPLRRIMRRL
EQIVLTERMRVKSINLCAVLLHSFVLELSYFCSVNVYCRKLLIKLMFPF"
BASE COUNT 256 a 274 c 267 g 273 t
ORIGIN
1 gtagtctgtt agtgggagat ccttgttgcc gtcccttcgc ctccttcacc gccgcagacc
61 ccttcaagtt ctagtcatgc gtgagtgcat ctccatccac gttggccagg ctggtgtcca
121 gattggcaat gcctgctggg agctctactg cctggaacac ggcatccagc ccgatggcca
181 gatgccaagt gacaagacca ttgggggagg agatgattcc ttcaacacct tcttcagtga
241 aacgggtgct ggcaagcatg tgccccgggc agtgtttgta gacttggaac ccacagtcat
301 tgatgaagtt cgcactggca cttaccgcca gctcttccac cctgagcaac tcatcacagg
361 caaggaagat gctgccaata actatgcccg agggcactac accattggca aggagatcat
421 tgacctcgtg ttggaccgaa ttcacaagtt tgacctgatg tatgccaagc gtgcctttgt
481 ccacttccct ctggccacat atgcccctgt catctctgct gagaaagcct accatgaaca
541 gcttactgta gcagagatca ccaatgcttg ctttgagcca gccaaccaga tggtgaaatg
601 tgaccctcgc catggtaaat acatggcttg ctgcctgtta taccgtggtg acgtggttcc
661 caaagatgtc aatgctgcca ttgccaccat caaaaccaag cgtaccatcc agtttgtgga
721 ttggtgcccc actggcttca aggttggcat taattaccag cctcccactg tggtgcctgg
781 cggagacctg gccaaggtac agagagctgt gtgcatgctg agcaatacca cagctgttgc
841 cgaggcctgg gctcgcctgg accacaagtt tgacctgccc ttgagaagga ttatgaggag
901 gttggagcag atagtgctga cggagaggat gagggtgaag agtattaacc tgtgtgctgt
961 acttttacac tcctttgtct tggaactgtc ttatttttgt tctgtaaatg tctattgccg
1021 taaattgtta ataaaattga tgtttccatt ttaaaaaaaa aaaaaaaaaa
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