LOCUS BC033038 4024 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 16, mRNA (cDNA clone MGC:33717 IMAGE:5262150), complete cds.
ACCESSION BC033038
VERSION BC033038.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4024)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4024)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC033038.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777629.
FEATURES Location/Qualifiers
source 1..4024
/db_xref="H-InvDB:HIT000041773"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33717 IMAGE:5262150"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4024
/gene="KCNJ16"
/gene_synonym="KIR5.1"
/gene_synonym="MGC33717"
/db_xref="GeneID:3773"
/db_xref="HGNC:HGNC:6262"
/db_xref="MIM:605722"
CDS 493..1749
/gene="KCNJ16"
/gene_synonym="KIR5.1"
/gene_synonym="MGC33717"
/codon_start=1
/product="potassium inwardly-rectifying channel, subfamily
J, member 16"
/protein_id="AAH33038.1"
/db_xref="GeneID:3773"
/db_xref="HGNC:HGNC:6262"
/db_xref="MIM:605722"
/translation="MSYYGSSYHIINADAKYPGYPPEHIIAEKRRARRRLLHKDGSCN
VYFKHIFGEWGSYVVDIFTTLVDTKWRHMFVIFSLSYILSWLIFGSVFWLIAFHHGDL
LNDPDITPCVDNVHSFTGAFLFSLETQTTIGYGYRCVTEECSVAVLMVILQSILSCII
NTFIIGAALAKMATARKRAQTIRFSYFALIGMRDGKLCLMWRIGDFRPNHVVEGTVRA
QLLRYTEDSEGRMTMAFKDLKLVNDQIILVTPITIVHEIDHESPLYALDRKAVAKDNF
EILVTFIYTGDSTGTSHQSRSSYVPREILWGHRFNDVLEVKRKYYKVNCLQFEGSVEV
YAPFCSAKQLDWKDQQLHIEKAPPVRESCTSDTKARRRSFSAVAIVSSCENPEETTTS
ATHEYRETPYQKALLTLNRISVESQM"
BASE COUNT 1215 a 775 c 805 g 1229 t
ORIGIN
1 gagaactcag tggcctttgt ctgtggtgaa tgtatccgga aaggcaaaga agagagagat
61 tctcttgtgg ggtttctcat ctccatggcg gtaggtgctg acagcttcag aagggtataa
121 cagggccaag agaaaagggc cctgagatgc tcagctacgg tgctcttaca agatgaaaag
181 gacatggggt tcagatctgc acttcatcat ctttcactaa gacatccaca ttccaccctg
241 ggccttgccc gtctggtgag cccaatctct gctggtcagt cacgcagttg aggtcaggga
301 aggagtaact caagatgatt ttgatgttgc agttttaaat ttcactttga cttgagctgg
361 gaaatccttt ggcctattat accatggatg ctaaaaatgg ttctaactga aaacccaaac
421 caagaaatag caacaagtct agaattctta ctactacaaa actcacctgg atccctaagg
481 gcacagcaaa gaatgagcta ttacggcagc agctatcata ttatcaatgc ggacgcaaaa
541 tacccaggct acccgccaga gcacattata gctgagaaga gaagagcaag aagacgatta
601 cttcacaaag atggcagctg taatgtctac ttcaagcaca tttttggaga atggggaagc
661 tatgtggttg acatcttcac cactcttgtg gacaccaagt ggcgccatat gtttgtgata
721 ttttctttat cttatattct ctcgtggttg atatttggct ctgtcttttg gctcatagcc
781 tttcatcatg gcgatctatt aaatgatcca gacatcacac cttgtgttga caacgtccat
841 tctttcacag gggccttttt gttctcccta gagacccaaa ccaccatagg atatggttat
901 cgctgtgtta ctgaagaatg ttctgtggcc gtgctcatgg tgatcctcca gtccatctta
961 agttgcatca taaatacctt tatcattgga gctgccttgg ccaaaatggc aactgctcga
1021 aagagagccc aaaccattcg tttcagctac tttgcactta taggtatgag agatgggaag
1081 ctttgcctca tgtggcgcat tggtgatttt cggccaaacc acgtggtaga aggaacagtt
1141 agagcccaac ttctccgcta tacagaagac agtgaaggga ggatgacgat ggcatttaaa
1201 gacctcaaat tagtcaacga ccaaatcatc ctggtcaccc cgataactat tgtccatgaa
1261 attgaccatg agagccctct gtatgccctt gaccgcaaag cagtagccaa agataacttt
1321 gagattttgg tgacatttat ctatactggt gattccactg gaacatctca ccaatctaga
1381 agctcctatg ttccccgaga aattctctgg ggccataggt ttaatgatgt cttggaagtt
1441 aagaggaagt attacaaagt gaactgctta cagtttgaag gaagtgtgga agtatatgcc
1501 cccttttgca gtgccaagca attggactgg aaagaccagc agctccacat agaaaaagca
1561 ccaccagttc gagaatcctg cacgtcggac accaaggcga gacgaaggtc atttagtgca
1621 gttgccattg tcagcagctg tgaaaaccct gaggagacca ccacttccgc cacacatgaa
1681 tatagggaaa caccttatca gaaagctctc ctgactttaa acagaatctc tgtagaatcc
1741 caaatgtagt cctaaattgc aattatgagg gctaccactg aatcatttta tctttcagcc
1801 aatcaagtcg ttgtaaacgt ggcttttttg aaagtgttat ggctatgttt tatgatgatg
1861 ctgggtaagt agagtaagtt aaacttggta aaagataatc taaaaattcc atagttctca
1921 gttattaaaa tttttcttgt tcgccaattt tgtattaaga atactattaa gcctaattga
1981 ttaaaattta tcttttttat tatcttacat gcttgtatct tcagttggag gtgtagtatt
2041 caaaaacggg gaatgaaggc aggaaggagg ctggaataaa taaaaataaa aatagacaag
2101 taagacagca taaataatac atttttaaac atgtcaacat tgataataca atgaagattt
2161 accataaaaa gtatcatatc taaccaagat atgcaaaaga tgcattcagt aagctgtaac
2221 gttgagaaat gtaactgtga aatcagctca ccagttcaag tcactaggtt tgccacttgg
2281 accgtcttgg tttcagcgag catagcgagt ggctgtaaga aattgtccat gccaccaatt
2341 ccactgctac ttgcccaggt agtgatcagt gagagttaga agcaattttt tctctaaccg
2401 atgaggcaga agaaaagtta acagtattta aagcagcatt tctctcttaa cgttcctggg
2461 agactccaac aaatggagac cagaaacaag gcaaccacga ccttgctagg ttctctgagg
2521 aggggacttt ctatgttaac gtcccacctt cttcgaggac atgaccaagg gacaggatca
2581 tacagatgag gtgaggggat ggttagcagc gataaacatt ctcagaccct tggagagaaa
2641 ccgttgctag cttgctggtc ccgaaagatt gcaactttgg ctgctacaga aaggatagaa
2701 cctttttggg gggagggtgg ggagggagat atttatttgt gcccagaagc agttatgtat
2761 gcttcttgtc ttggttactg tacaagatac aaatgactcg agttgtggat tgcaagaaac
2821 tcttttatta aacttggaac aaccatttaa atgaaggatt ttgtgagata gaattcaatt
2881 aaagcgattt gaatgcacag taagtggata atctgagtac aatgaaattt cttaagtttt
2941 agaacatgag ataaagttgt atactctact ttcatgttaa aatgttaatc atgattactt
3001 taagcccaca tccactgagt aaagagtcac tttaaacttt ataaatcaaa gagatattag
3061 gaacattcag aattatttgt gttttgtttt tgttttacat tgttgctgca ctggcaataa
3121 gtatgtggca ctgtttttat ttgtttatgt tatttaaata cacacccaga cacacacaca
3181 cacagttttt gctttttctg gaaaatcttt ctttctcttc tctctccatg aaaattaaaa
3241 cacacaagtg aatgaagtaa ttacatagtc caagattaga aatacaagta aaatatatag
3301 gtataggtag atagagtgcc tttctgtttc ttttcttttc ttttttcttt ttttgttctt
3361 ccttcctttc ttccctcctc cccctcatcc ttccctttct ccttcttttc cctttttttt
3421 ttttttttga cctgggagta ataaagttac tttttaaatg cacgtatgca atcttttatt
3481 cctcttgttt tatggataag agatttgttc aggtcaaaag ttgcaaaact gttctgaagc
3541 ttaatattag agacccaagt aagattgttt ttagtcttgc ttgaggaatg cacactccat
3601 ttaaaaaatt gtgcgctctg tagatttgga ttttacagca gcaattactt ggctaaatta
3661 gagtactgca atcttgtaag tagaaaacag ccaccatgac aataaacaaa aacacttaaa
3721 aatattttta gcttgtttta cctacatcta gtttcatttc atcttgcttt gctttgttga
3781 ctctgctacc gctgatgttt gccttgtcaa tatcagaata ggggcatcag tgtcccgtga
3841 aatacatttt gttgtgctat gagcctctgt aatcaaatgc ttgtactcat aagagagtgt
3901 aaaatcagca tttctatgta acatatatct ctaattatct gtgtaatttt ataacatact
3961 ttgacaaccc cagtgagtta cttaataata aagatcttaa aataatgcaa aaaaaaaaaa
4021 aaaa
//