LOCUS BC032850 2489 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens cystinosis, nephropathic, mRNA (cDNA clone MGC:33097
IMAGE:5268683), complete cds.
ACCESSION BC032850
VERSION BC032850.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2489)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC032850.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4826681.
FEATURES Location/Qualifiers
source 1..2489
/db_xref="H-InvDB:HIT000051077"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33097 IMAGE:5268683"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2489
/gene="CTNS"
/gene_synonym="CTNS-LSB"
/gene_synonym="PQLC4"
/db_xref="GeneID:1497"
/db_xref="HGNC:HGNC:2518"
/db_xref="MIM:606272"
CDS 460..1662
/gene="CTNS"
/gene_synonym="CTNS-LSB"
/gene_synonym="PQLC4"
/codon_start=1
/product="cystinosis, nephropathic"
/protein_id="AAH32850.1"
/db_xref="GeneID:1497"
/db_xref="HGNC:HGNC:2518"
/db_xref="MIM:606272"
/translation="MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSL
TLRPPLNATLVITFEITFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLH
GNHSNQTGPRIRFLVIRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSF
DFVALNLTGFVAYSVFNIGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLI
IIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAV
TLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPT
KFGLGVFSIVFDVVFFIQHFCLYRKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTS
VSASSLKG"
BASE COUNT 519 a 738 c 631 g 601 t
ORIGIN
1 aatggagggc ggtctgagct tcgctcacga aaggagccgg gaggcgctgg cggctccaag
61 agtctctgtg tccctggcag cggacctcat cttccctcac gccggagccc cgatctctgc
121 gccccggccc gacccagctg cgctctgtcc gtctaagacg cgcggaaact acaactccca
181 gagctcatct cgccgagatc cggccccacg agtcaggtgg cggaggtcag attgctttgg
241 agacgctgag agaacctttg cgagagcgcc ggttgacgtg cggagtgcgg ggctccgggg
301 gactgagcag cacgagaccc catcctcccc tccgggtttt cacactgggc gaagggagga
361 ctcctgagct ctgcctcttc cagtaacatt gaggattact gtgttttgtg agagctcgct
421 aggcgcccta agcaacagag ttctgagaaa tcgagaaaca tgataaggaa ttggctgact
481 atttttatcc tttttcccct gaagctcgta gagaaatgtg agtcaagcgt cagcctcact
541 gttcctcctg tcgtaaagct ggagaacggc agctcgacca acgtcagcct caccctgcgg
601 ccaccattaa atgcaaccct ggtgatcact tttgaaatca catttcgttc caaaaatatt
661 actatccttg agctccccga tgaagttgtg gtgcctcctg gagtgacaaa ctcctctttt
721 caagtgacat ctcaaaatgt tggacaactt actgtttatc tacatggaaa tcactccaat
781 cagaccggcc cgaggatacg ctttcttgtg atccgcagca gcgccattag catcataaac
841 caggtgattg gctggatcta ctttgtggcc tggtccatct ccttctaccc tcaggtgatc
901 atgaattgga ggcggaaaag tgtcattggt ctgagcttcg acttcgtggc tctgaacctg
961 acaggcttcg tggcctacag tgtattcaac atcggcctcc tctgggtgcc ctacatcaag
1021 gagcagtttc tcctcaaata ccccaacgga gtgaaccccg tgaacagcaa cgacgtcttc
1081 ttcagcctgc acgcggttgt cctcacgctg atcatcatcg tgcagtgctg cctgtatgag
1141 cgcggtggcc agcgcgtgtc ctggcctgcc atcggcttcc tggtgctcgc gtggctcttc
1201 gcatttgtca ccatgatcgt ggctgcagtg ggagtgatca cgtggctgca gtttctcttc
1261 tgcttctcct acatcaagct cgcagtcacg ctggtcaagt attttccaca ggcctacatg
1321 aacttttact acaaaagcac tgagggctgg agcattggca acgtgctcct ggacttcacc
1381 gggggcagct tcagcctcct gcagatgttc ctccagtcct acaacaacga ccagtggacg
1441 ctgatcttcg gagacccaac caagtttgga ctcggggtct tctccatcgt cttcgacgtc
1501 gtcttcttca tccagcactt ctgtttgtac agaaagagac cggggcttca ggcagcgcgc
1561 acaggctctg gcagccgtct caggcaggac tgggcaccaa gcttgcagcc gaaggccttg
1621 ccccaaacta ccagcgtttc tgcaagcagc ttgaagggct gaccttgcag ccgggtgagc
1681 caagggcact ttgctgccac cactgcgttc ccagagacca agcagcccgg tgccgtggcc
1741 agtgaactca gaggtgctgg tggacgggct aggactttgg ggttaggcca tggggctctt
1801 tctctgaagg ccactttcct gacgtactct ctgtacataa ctcagcgtcc gcgactgcag
1861 taacagccgg ccctacccag agtatttctg agccatgagg ggcccaccag attggttctg
1921 aatcggactc atgcccagcg cattagcata gtaactcctt tcagattttt tggagggacg
1981 tttggaagtg gcttactctc ttctgccctc tttcctacct ccaccttctc agatgagccc
2041 catctgagca catccagctg ctccttaccc agcatctgga gtacaggaca tagctctctc
2101 ctgctaccag tctgtgcctt agaggtctgt taggcctgcc aaacggcgac cagctcccct
2161 ggagcgaggg caggcccctt ccctctcttt ccccagacac ctacttgaga ctcaccaatt
2221 tctggcctgt tcaggagcct cagataagta tttgtacttg agaccacctc acacaatctg
2281 tatgggccca accctgatct caaacctcct tccctctgcc tgaagctgtc gtccttccta
2341 tggcaggagg gggggggggt cccaggacgt gcctcataca tgacttgagc ttgtcagtcc
2401 actgagtttc cttctatgag atcaacgcga ggggcctgta tcttgaatta aagcctactc
2461 gcttcctttc tgcaaaaaaa aaaaaaaaa
//