LOCUS BC032833 3773 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 13A, mRNA (cDNA clone MGC:26764
IMAGE:4830174), complete cds.
ACCESSION BC032833
VERSION BC032833.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3773)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3773)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC032833.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: h Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38683798.
FEATURES Location/Qualifiers
source 1..3773
/db_xref="H-InvDB:HIT000051068"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26764 IMAGE:4830174"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3773
/gene="ANKRD13A"
/gene_synonym="NY-REN-25"
/db_xref="GeneID:88455"
/db_xref="HGNC:HGNC:21268"
CDS 101..1873
/gene="ANKRD13A"
/gene_synonym="NY-REN-25"
/codon_start=1
/product="ankyrin repeat domain 13A"
/protein_id="AAH32833.2"
/db_xref="GeneID:88455"
/db_xref="HGNC:HGNC:21268"
/translation="MSSACDAGDHYPLHLLVWKNDYRQLEKELQGQNVEAVDPRGRTL
LHLAVSLGHLESARVLLRHKADVTKENRQGWTVLHEAVSTGDPEMVYTVLQHRDYHNT
SMALEGVPELLQKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDIT
LLGFENMSWIRGRRSFIFKGEDNWAELMEVNHDDKVVTTERFDLSQEMERLTLDLMKP
KSREVERRLTSPVINTSLDTKNIAFERTKSGFWGWRTDKAEVVNGYEAKVYTVNNVNV
ITKIRTEHLTEEEKKRYKAGRNPLESLLGTVEHQFGAQGDLTTECATANNPTAITPDE
YFNEEFDLKDRDIGRPKELTIRTQKFKAMLWMCEEFPLSLVEQVIPIIDLMARTSAHF
ARLRDFIKLEFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEESVSQNVEGTQADSA
SHITNFEVDQSVFEIPESYYVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQELSGP
ASNGGISQTNTYDAQYERAIQESLLTSTEGLCPSALSETSRFDNDLQLAMELSAKELE
EWELRLQEEEAELQQVLQLSLTDK"
BASE COUNT 1070 a 854 c 880 g 969 t
ORIGIN
1 gctggctcgc cggcctcagg gcaggcaggc gggcgcggga gaccccgccg gggccgagac
61 ttggggcggg cgacgaggac caggttacgg cctcctcgcc atgtcctcgg cctgcgacgc
121 gggcgaccac taccccctgc acctcctagt ctggaaaaac gactaccggc agctcgagaa
181 ggagctgcag ggccagaatg tggaggctgt ggacccacga ggtcgaacat tattgcatct
241 tgctgtttcc ttgggacatt tggaatctgc tcgagtctta ctccgacata aagcagatgt
301 gacaaaagaa aatcgccagg gatggacagt tttacatgag gctgtgagca ctggcgatcc
361 tgagatggtg tacacagttc tccaacatcg agactaccac aacacatcca tggcccttga
421 gggagttcct gagctgctcc aaaaaattct cgaggctccg gatttctatg tgcagatgaa
481 atgggaattc accagctggg tgcccttggt ttctagaata tgcccaaatg atgtctgtcg
541 catctggaaa agtggtgcca aactgcgcgt cgatatcaca ttgctgggat ttgaaaacat
601 gagctggata agagggaggc gtagttttat atttaaggga gaagacaact gggcggagtt
661 aatggaagtc aaccatgatg acaaagtggt caccaccgaa cgcttcgacc tttcccaaga
721 aatggagcgc ctcactctgg acttgatgaa gccaaaaagc agggaagttg agcggcggct
781 cacaagccct gtcattaaca ccagcctcga tactaaaaat attgcttttg aaagaactaa
841 atccggattc tggggctgga ggacagataa agcagaagtt gttaatggtt acgaagcaaa
901 ggtttacaca gtaaacaatg tgaatgtgat caccaaaata cgcacagaac atctgaccga
961 ggaggaaaaa aagagatata aagcaggcag gaacccgctg gaatctttgc tgggaactgt
1021 ggaacaccaa tttggtgcac aaggggacct caccacggaa tgtgctactg caaacaaccc
1081 cacagccatc acgcctgatg agtacttcaa tgaagagttt gatctgaaag acagggacat
1141 tggaaggccg aaagagctga cgattagaac acagaagttt aaagcaatgt tgtggatgtg
1201 tgaagagttt cccctctctc tggtggagca ggtcattccc atcattgacc taatggctcg
1261 aacgagtgct cattttgcaa gactgagaga tttcatcaaa ttggaattcc cacctggatt
1321 tcctgtcaaa atagaaattc ccttgtttca tgtcttaaat gcacggatta catttggaaa
1381 tgttaatggc tgtagcactg ccgaagaatc tgtatctcaa aatgtggaag ggacccaggc
1441 tgattcagct tcccacatca caaactttga ggttgatcaa tctgtgtttg aaattcccga
1501 atcttactat gttcaagaca atggcagaaa tgtgcatttg caagatgaag attacgagat
1561 aatgcagttt gccatccagc aaagtctgct ggagtccagc aggagccagg aactttcagg
1621 accagcttcg aatggaggga tcagccagac aaacacctat gacgcccagt atgagagggc
1681 catccaggag agcctcctca ccagcacaga aggcctgtgc cccagcgccc tgagcgagac
1741 aagccgtttt gataatgact tgcagctagc catggagctc tctgccaaag agctggagga
1801 atgggagctc cggctccagg aggaagaggc tgagctccag caagtcttac agctgtcact
1861 cactgacaaa tagacctttc agcctgtgag cctctgcaca aagcagaggc tgtgggctgt
1921 cacagatgct gtgtcaacca gggccctagg gctaagggcc tgcaccttgc gtgcatgcag
1981 caggcaacaa ctgccccttc tttatgcaga ggtgcagaac cagggactcc tgggcccatc
2041 caggctgctc cctggggtgg agaagggacc agggattgca ggccccatct ccaggctaag
2101 gggaggagag catcatcact ttccattagc tgtattggct tgcaggtcac atttttacta
2161 ccagctttag acaaaacccc aatccccgca ggtttgtaga taaattttta tcaaggagtg
2221 ataacaagac aagttattgc agagtcaggg tgcttttata tataagagca gcagccgcct
2281 ttgtaaagtg tgatctatga gaattggaga cacttcttta ctgttcacca aagaaatggg
2341 taatctgtgc tgatctcctt atttttacct ttttacaggg tttctaggac attgtcatta
2401 ttcttcctcc atctatctga ttccattcct tccacaccca gctaaagtta gaggagatac
2461 atatagaatc tattttagat tattgttaac tatttgcatc aaattaagat acacaaatgg
2521 ccatggatgt tgccttagcc ttaaacatta ctaatagttt cacatcacct cactgcacgc
2581 atcgaaggat ctgatttgaa tttgtaaagg caattctttt gagagcagga ttctccaggc
2641 taaatcaaag gcagctaatc ctgtccctga aggagcagct aggggaacct gaggcttgtt
2701 cttgaagtgg gcaagctggc caaaatattg gaacacacag aaccaaacca ggtgtgttct
2761 acacctgcat gagtgaagga tttccacgta gacacctagg aagagcccgc atgccctaga
2821 ctcactccag aggaaggatt gatttgcaac cagaaaggga gctgaaaacc acggagctcc
2881 atggctcttc attcaaaagg gaaaataatg attccacgtt gctttttaga gttcaaatca
2941 acatctttct ggataaatct attttttaac aatcttttta ttatttgtaa aagatataaa
3001 aacaactccc atcagtagca atacaaggtt atacatttta accagatttt ctcaggcctt
3061 ttttggatac ctttagtagt taactctctt ttgtcaaacc ctcttgtata taaccatcgc
3121 acaacataca gaaccctggg gaatacagcc aagggcactg ctcactgtgg cccgtgtatt
3181 cattcccaca ggctgcactg aaataacctg gtaaacaaca ccctcctcca ttttgcgtct
3241 atttcttcta ttgtgcttct ttggggatag gaagagaaac ataactactg ttccaggtaa
3301 cgtctgtatc atacagttag tgttgccagt gaaacgttcc cagatacaaa gaattgtgct
3361 tttaattcca tttcacaatc tgttttgttt tttttttttg tcattgtctg accaaaattc
3421 cttctgcaca tgaggccagt ataggcaacg tcacatttgt ttgtttcaaa tatgcagtgt
3481 ggtattttgt ttactttgca tttaccgtga gcaaagatac ttcttggaat ggctgcagtg
3541 aggccgtgtc attggctcac aaaagtgact cataggtaat ttctgtgttt gcattccact
3601 gctctgctcc ctaaggtcct tgactttctc cccaggaatt cacttaaaaa gggactgagc
3661 attgtgtcaa cctgttgcag tgtttttcat atatgtgttc actctaaaaa tgcaaataaa
3721 gactgcttcc ttagagggtg ctcatacaaa aaaaaaaaga aaaaaaaaaa aaa
//