LOCUS BC032703 1905 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peripherin, mRNA (cDNA clone MGC:45209 IMAGE:5247559),
complete cds.
ACCESSION BC032703
VERSION BC032703.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1905)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1905)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: d Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66932907.
FEATURES Location/Qualifiers
source 1..1905
/db_xref="H-InvDB:HIT000041679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45209 IMAGE:5247559"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1905
/gene="PRPH"
/db_xref="GeneID:5630"
/db_xref="HGNC:HGNC:9461"
/db_xref="MIM:170710"
CDS 36..1448
/gene="PRPH"
/codon_start=1
/product="peripherin"
/protein_id="AAH32703.1"
/db_xref="GeneID:5630"
/db_xref="HGNC:HGNC:9461"
/db_xref="MIM:170710"
/translation="MSHHPSGLRAGFSSTSYRRTFGPPPSLSPGAFSYSSSSRFSSSR
LLGSASPSSSVRLGSFRSPRAGAGALLRLPSERLDFSMAEALNQEFLATRSNEKQELQ
ELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLCQQELRELRRELELLGR
ERDRVQVERDGLAEDLAALKQRLEEETRKREDAEHNLVLFRKDVDDATLSRLELERKI
ESLMDEIEFLKKLHEEELRDLQVSVESQQVQQVEVEATVKPELTAALRDIRAQYESIA
AKNLQEAEEWYKSKYADLSDAANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNE
ALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLNVKMALDIE
IATYRKLLEGEESRISVPVHSFASLNIKTTVPEVEPPQDSHSRKTVLIKTIETRNGEV
VTESQKEQRSELDKSSAHSY"
BASE COUNT 491 a 556 c 572 g 286 t
ORIGIN
1 gctctgcgaa cggtgactgc ccatccttgg ccgcaatgag ccaccacccg tcgggcctcc
61 gggccggctt cagctccacc tcataccgcc gtaccttcgg tccaccgccc tcactatccc
121 ccggggcctt ctcctactcg tccagctccc gcttctccag cagccgcctg ctgggctccg
181 cgtccccgag ctcctcggtg cgcctgggca gcttccgtag cccccgagcg ggagcgggcg
241 ccctcctgcg cctgccctcg gagcgcctcg acttctccat ggccgaggcc ctcaaccagg
301 agttcctggc cacgcgcagc aacgagaagc aggagctgca ggagctcaac gaccgcttcg
361 ccaacttcat cgagaaggta cgctttctgg agcagcagaa cgcggccctg cgcggggagc
421 tgagccaagc ccggggccag gagccggcgc gcgccgacca gctgtgccag caggagctgc
481 gcgagctgcg gcgagagctg gagctgttgg gccgcgagcg tgaccgggtg caggtggagc
541 gcgacgggct ggcggaggac ctggcggcgc tcaagcagag gttggaggag gagacgcgca
601 agcgggagga cgcggagcac aacctcgtgc tcttccgcaa ggacgtggac gatgccactc
661 tgtcccgcct ggaactagag cgcaagattg agtctctgat ggatgagatt gagttcctca
721 agaagctgca cgaggaggag ctgcgagacc tgcaggtgag tgtggagagc cagcaggtgc
781 agcaggtgga ggtggaagcc acggtgaagc ccgagctgac ggcagcgctg agggacatcc
841 gcgcgcagta cgagagcatc gccgcgaaga acctgcagga ggcggaggag tggtacaagt
901 ccaagtacgc ggacctgtcc gacgctgcca accggaacca cgaggccctg cgccaggcca
961 agcaggagat gaacgagtcc cgacgccaga tccagagtct aacgtgcgag gtggacgggc
1021 tgcgcggcac gaacgaggcg ctgctcaggc agttgagaga gctggaggag cagttcgccc
1081 tggaggcggg gggctaccag gcgggcgctg cgcggctcga ggaggagctg cgacagctaa
1141 aagaggagat ggcgcggcac ctgagggagt accaggagct cctcaacgtc aagatggccc
1201 tggacatcga gatcgccacc taccgcaagc tgctggaggg cgaggagagc cggatctccg
1261 tgcccgtcca ttcttttgcc tccttaaata taaagacgac tgtgcctgag gtggagcctc
1321 cccaggacag ccacagccgg aagacggttc tgatcaagac cattgagacc cggaatgggg
1381 aggtggtgac agagtcccag aaggagcagc gcagtgagct ggacaagtct tctgcccaca
1441 gttactgaac cccttggtcc ggagccttga ctctgcccta ggcctgctca aagcccaaac
1501 cctaagacca ctcctgaatt gtctcctctc cctctgcatg tgtctaaaag gtggtaccag
1561 gcatcccttt cctggcttat ggccaagccc tacccggcca gcagtcgctg ggcctctccc
1621 tgccctgaca cttgatgtga cctatgtgct tcccttttca tgtcccgata agaagccaat
1681 gatcccccct caggacaaat ctactccagc cacgatgaga agtgggtgag ccagggtctg
1741 agtttcacat ttgaaccaaa taaaatgctg tcaagagaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//