LOCUS BC032695 931 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens glutathione peroxidase 4 (phospholipid
hydroperoxidase), mRNA (cDNA clone MGC:45347 IMAGE:5227887),
complete cds.
ACCESSION BC032695
VERSION BC032695.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 931)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 931)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504106.
FEATURES Location/Qualifiers
source 1..931
/db_xref="H-InvDB:HIT000092767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45347 IMAGE:5227887"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..931
/gene="GPX4"
/gene_synonym="MCSP"
/gene_synonym="PHGPx"
/gene_synonym="snGPx"
/gene_synonym="snPHGPx"
/db_xref="GeneID:2879"
/db_xref="HGNC:HGNC:4556"
/db_xref="MIM:138322"
CDS 40..633
/gene="GPX4"
/gene_synonym="MCSP"
/gene_synonym="PHGPx"
/gene_synonym="snGPx"
/gene_synonym="snPHGPx"
/codon_start=1
/transl_except=(pos:256..258,aa:OTHER)
/product="GPX4 protein"
/protein_id="AAH32695.3"
/db_xref="GeneID:2879"
/db_xref="HGNC:HGNC:4556"
/db_xref="MIM:138322"
/translation="MSLGRLCRLLKPALLCGALAAPGLAGTMCASRDDWRCARSMHEF
SAKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPC
NQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNA
IKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF"
BASE COUNT 264 a 268 c 257 g 142 t
ORIGIN
1 ggacgagggg aggagccgct ggctcccagc cccgccgcga tgagcctcgg ccgcctttgc
61 cgcctactga agccggcgct gctctgtggg gctctggccg cgcctggcct ggccgggacc
121 atgtgcgcgt cccgggacga ctggcgctgt gcgcgctcca tgcacgagtt ttccgccaag
181 gacatcgacg ggcacatggt taacctggac aagtaccggg gcttcgtgtg catcgtcacc
241 aacgtggcct cccagtgagg caagaccgaa gtaaactaca ctcagctcgt cgacctgcac
301 gcccgatacg ctgagtgtgg tttgcggatc ctggccttcc cgtgtaacca gttcgggaag
361 caggagccag ggagtaacga agagatcaaa gagttcgccg cgggctacaa cgtcaaattc
421 gatatgttca gcaagatctg cgtgaacggg gacgacgccc acccgctgtg gaagtggatg
481 aagatccaac ccaagggcaa gggcatcctg ggaaatgcca tcaagtggaa cttcaccaag
541 ttcctcatcg acaagaacgg ctgcgtggtg aagcgctacg gacccatgga ggagcccctg
601 gtgatagaga aggacctgcc ccactatttc tagctccaca agtgtgtggc cccgcccgag
661 cccctgccca cgccctcgga gccttccacc ggcactcatg acggcctgcc tgcaaacctg
721 ctggtggggc agacccgaaa atccagcgtg caccccgccg gaggaaggtc ccatggcctg
781 ctgggcttgg ctcggcgccc ccacccctgg ctaccttgtg ggaataaaca gacaaattag
841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//