LOCUS BC032667 1933 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens keratocan, mRNA (cDNA clone MGC:45082 IMAGE:5541591),
complete cds.
ACCESSION BC032667
VERSION BC032667.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1933)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1933)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC032667.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: l Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865891.
FEATURES Location/Qualifiers
source 1..1933
/db_xref="H-InvDB:HIT000041661"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45082 IMAGE:5541591"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1933
/gene="KERA"
/gene_synonym="SLRR2B"
/db_xref="GeneID:11081"
/db_xref="HGNC:HGNC:6309"
/db_xref="MIM:603288"
CDS 10..1068
/gene="KERA"
/gene_synonym="SLRR2B"
/codon_start=1
/product="keratocan"
/protein_id="AAH32667.1"
/db_xref="GeneID:11081"
/db_xref="HGNC:HGNC:6309"
/db_xref="MIM:603288"
/translation="MAGTICFIMWVLFITDTVWSRSVRQVYEVHDSDDWTIHDFECPM
ECFCPPSFPTALYCENRGLKEIPAIPSRIWYLYLQNNLIETIPEKPFENATQLRWINL
NKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQLARNKVSRIPQG
TFSNLENLTLLDLQNNKLVDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPANTMQL
FLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDEGLPSRGFDVSSILDLQLSHNQLTK
VPRISAHLQHLHLDHNKIKSVNVSVICPSPSMLPAERDSFSYGPHLRYLRLDGNEIKP
PIPMALMTCFRLLQAVII"
BASE COUNT 652 a 355 c 314 g 612 t
ORIGIN
1 ggtgctataa tggcaggcac aatctgtttc atcatgtggg tgttattcat aacagacact
61 gtgtggtcta gaagtgtaag gcaggtctat gaagtacatg attcagatga ttggactatt
121 catgacttcg agtgtcccat ggaatgtttc tgcccaccca gttttcctac tgctttatat
181 tgtgaaaata gaggtctcaa agaaattcct gctattcctt caagaatttg gtatctttat
241 cttcaaaaca acctgataga aaccattcct gaaaagccat ttgagaatgc cacccagcta
301 agatggataa atctaaacaa gaacaaaata accaactacg gaattgaaaa aggagcccta
361 agccagctga agaagttgct cttcttattt ctggaagata atgagctaga ggaggtacct
421 tctccattgc caagaagttt agaacaatta caattagcta gaaataaggt gtccagaatt
481 cctcaaggga cctttagcaa tctggagaac ctgacccttc ttgacctaca gaacaacaaa
541 ttagtggaca atgcctttca aagagacact tttaaaggac tcaagaatct catgcagcta
601 aacatggcca agaatgccct gaggaatatg cctccaagat taccagccaa tacaatgcag
661 ttgtttttag acaacaattc cattgaagga ataccagaaa attattttaa tgtgattcct
721 aaagtggcct ttttgagact aaatcacaac aaactgtcag atgagggtct cccatcaaga
781 ggatttgatg tatcatcaat tctagatctt caactgtcgc acaatcaact cacaaaggtt
841 ccccgaatca gtgctcatct gcagcacctt caccttgatc ataacaaaat taaaagtgtg
901 aatgtctctg taatatgtcc cagcccatcc atgctgcctg cagaacgaga ttccttcagt
961 tatggacctc atcttcgcta cctccgtctg gatggaaatg aaatcaaacc accaattcca
1021 atggctttaa tgacctgctt cagacttctg caggctgtca ttatttaaac acattctcac
1081 caaatctaaa attagtttaa tgagctgttt ctgacatgaa atgtggttac cattaatagg
1141 tttaggacac aagtcatatt ccccattgct ctcggccacc attttcattt gtgcagtgta
1201 ttttttctat tcaaagatgc ttttgccagt tacatgcatc acagcctgca ttaatttgct
1261 tttcttttaa ttaataaaac agacacagag ttaagatagt ttatcaactc aaagatagtt
1321 ttattttggt ctcttccata gcttattaac actaaagaaa acaattacat tcttatacaa
1381 taaaaaggac acatttgtgt atgtttaaaa ttacttatgc agataccgta atttacagta
1441 taaatgtaat aatcaaacag gaggataacg acctgaagaa aatgagaaaa taaaatattt
1501 cttaattgta atcataataa aacaattgca gattgctaag tagctgttgg tggtacaagt
1561 ttgatattta gcttgagaat gggtatggaa tgaatcaaat acttcatcac taaagaattc
1621 ttgttattta atatcaaata atgaaacagc agtcacttct agttcattac catttcttgt
1681 agctgttgtt tttagatata gtccactgca ttcttataag ttctaaattt tatgtttatt
1741 ataatgcatt tcttgtggaa tcttagtgtt ttaacatttg aaatccactt aaactgcaaa
1801 ttgttcttta tatttgattg tgttttttgg attttctaaa taaaaatatt gaatgctttc
1861 taacaaaaca gaatatttca aagaaattag caagcttcat taaagaacat gttttaataa
1921 aaaaaaaaaa aaa
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