LOCUS BC032656 2165 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens transcription factor 7-like 2 (T-cell specific,
HMG-box), mRNA (cDNA clone MGC:44932 IMAGE:5533185), complete cds.
ACCESSION BC032656
VERSION BC032656.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2165)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13540470.
FEATURES Location/Qualifiers
source 1..2165
/db_xref="H-InvDB:HIT000041655"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44932 IMAGE:5533185"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2165
/gene="TCF7L2"
/gene_synonym="TCF-4"
/gene_synonym="TCF4"
/db_xref="GeneID:6934"
/db_xref="MIM:602228"
CDS 97..1464
/gene="TCF7L2"
/gene_synonym="TCF-4"
/gene_synonym="TCF4"
/codon_start=1
/product="TCF7L2 protein"
/protein_id="AAH32656.1"
/db_xref="GeneID:6934"
/db_xref="MIM:602228"
/translation="MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADV
KSSLVNESETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPG
YPFIMIPDLTSPYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHI
VSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISP
YYPLSPGTVGQIPHPLGWQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHT
LHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYM
KEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA
RDNYGKKKKRKRDKQPGETNEHSECFLNPCLSLPPITGEKKSAFATYKVKAAASAHPL
QMEAY"
misc_feature 1072..1266
/gene="TCF7L2"
/gene_synonym="TCF-4"
/gene_synonym="TCF4"
/note="HMG_box; Region: HMG (high mobility group) box"
/db_xref="CDD:pfam00505"
BASE COUNT 584 a 652 c 461 g 468 t
ORIGIN
1 ccacgcgtcc gcaaaacttt ttgggggtga ttttttttgg cttttcttcc tccttcattt
61 ttcttccaaa attgctgctg gtgggtgaaa aaaaaaatgc cgcagctgaa cggcggtgga
121 ggggatgacc taggcgccaa cgacgaactg atttccttca aagacgaggg cgaacaggag
181 gagaagagct ccgaaaactc ctcggcagag agggatttag ctgatgtcaa atcgtctcta
241 gtcaatgaat cagaaacgaa tcaaaacagc tcctccgatt ccgaggcgga aagacggcct
301 ccgcctcgct ccgaaagttt ccgagacaaa tcccgggaaa gtttggaaga agcggccaag
361 aggcaagatg gagggctctt taaggggcca ccgtatcccg gctacccctt catcatgatc
421 cccgacctga cgagccccta cctccccaac ggatcgctct cgcccaccgc ccgaacctat
481 ctccagatga aatggccact gcttgatgtc caggcaggga gcctccagag tagacaagcc
541 ctcaaggatg cccggtcccc atcaccggca cacattgtct ctaacaaagt gccagtggtg
601 cagcaccctc accatgtcca ccccctcacg cctcttatca cgtacagcaa tgaacacttc
661 acgccgggaa acccacctcc acacttacca gccgacgtag accccaaaac aggaatccca
721 cggcctccgc accctccaga tatatccccg tattacccac tatcgcctgg caccgtagga
781 caaatccccc atccgctagg atggcaaggt caaccagtgt acccaatcac gacaggagga
841 ttcagacacc cctaccccac agctctgacc gtcaatgctt ccatgtccag gttccctccc
901 catatggtcc caccacatca tacgctacac acgacgggca ttccgcatcc ggccatagtc
961 acaccaacag tcaaacagga atcgtcccag agtgatgtcg gctcactcca tagttcaaag
1021 catcaggact ccaaaaagga agaagaaaag aagaagcccc acataaagaa acctcttaat
1081 gcattcatgt tgtatatgaa ggaaatgaga gcaaaggtcg tagctgagtg cacgttgaaa
1141 gaaagcgcgg ccatcaacca gatccttggg cggaggtggc atgcactgtc cagagaagag
1201 caagcgaaat actacgagct ggcccggaag gagcgacagc ttcatatgca actgtacccc
1261 ggctggtccg cgcgggataa ctatggaaag aagaagaaga ggaaaaggga caagcagccg
1321 ggagagacca atgaacacag cgaatgtttc ctaaatcctt gcctttcact tcctccgatt
1381 acaggagaaa aaaaaagtgc gttcgctaca tacaaggtga aggcagctgc ctcagcccac
1441 cctcttcaga tggaagctta ctagattcgc ctcccccctc cccgaacctg ctaggctccc
1501 ctccccgaga cgccaagtca cagactgagc agacccagcc tctgtcgctg tccctgaagc
1561 ccgaccccct ggcccacctg tccatgatgc ctccgccacc cgccctcctg ctcgctgagg
1621 ccacccacaa ggcctccgcc ctctgtccca acggggccct ggacctgccc ccagccgctt
1681 tgcagcctgc cgccccctcc tcatcaattg cacagccgtc gacttcttcc ttacattccc
1741 acagctccct ggccgggacc cagccccagc cgctgtcgct cgtcaccaag tctttagaat
1801 agctttagcg tcgtgaaccc cgctgctttg tttatggttt tgtttcactt ttcttaattt
1861 gccccccacc cccaccttga aaggttttgt tttgtactct cttaattttg tgccatgtgg
1921 ctacattagt tgatgtttat cgagttcatt ggtcaatatt tgacccattc ttatttcaat
1981 ttctcctttt aaatatgtag atgagagaag aacctcatga ttctaccaaa atttttatca
2041 acagctgttt aaagtctttg tagcgtttaa aaaatatata tatatacata actgttatgt
2101 agttcggata gcttagtttt aaaagactga ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaa
//