LOCUS BC032554 2694 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens ankyrin repeat domain 13B, mRNA
(cDNA clone MGC:45496 IMAGE:5557374), complete cds.
ACCESSION BC032554
VERSION BC032554.1
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 2694)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2694)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33636763
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2694
/db_xref="H-InvDB:HIT000092707"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Skin, melanotic
melanoma."
/db_xref="taxon:32630"
/clone="MGC:45496 IMAGE:5557374"
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2694
/gene="ANKRD13B"
/db_xref="GeneID:124930"
/db_xref="HGNC:HGNC:26363"
CDS 161..2041
/gene="ANKRD13B"
/codon_start=1
/transl_table=11
/product="ANKRD13B protein"
/protein_id="AAH32554.3"
/db_xref="GeneID:124930"
/db_xref="HGNC:HGNC:26363"
/translation="MIPANASARKGPEGKYPLHYLVWHNRHRELEKEVRAGQVDIEQL
DPRGRTPLHLATTLGHLECARVLLAHGADVGRENRSGWTVLQEAVSTRDLELVQLVLR
YRDYQRVVKRLAGIPVLLEKLRKPQDFYVEMKWEFTSWVPLVSKICPSDTYKVWKSGQ
NLRVDTTLLGFDHMTWQRGNRSFVFRGQDTSAVVMEIDHDRRVVYTETLALAGQDREL
LLAAAQPTEEQVLSRLTAPVVTTQLDTKNISFERNKTGILGWRSEKTEMVNGYEAKVY
GASNVELITRTRTEHLSEHHKGKVKGCKTPLQSFLGIAEQHGGPQNGTLITQTLSQAN
PTAITAEEYFNPNFELGNRDMGRPMELTTKTQKFKAKLWLCEEHPLSLCEQVAPIIDL
MAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDEPVPSVRGSP
SSETPSPGSDSSSVSSSSSTTSCRGCEISPALFEAPRGYSMMGGQREAATRDDDDDLL
QFAIQQSLLEAGSEYDQVTIWEALTNSKPGTHPMSYEGRRQDRSAPPTPQRQPAPPAS
VPSPRPSSGPGSGGHVFRSYDEQLRLAMELSAQEQEERRRRARQEEEELERILRLSLT
EQ"
BASE COUNT 556 a 923 c 822 g 393 t
ORIGIN
1 ccacgcgtcc gcccacgcgt ccgcccacgc gtccgcccac gcgtccggca gccccgcgag
61 caggcagcgc cggccccccg ccccgcggcc ccgggccccg gctccggcgc cgtccctcct
121 ccccggccgg gcgccgcggc cccggcatga ggagcgggcg atgatccccg ccaacgcctc
181 cgccaggaag gggcccgagg gcaagtatcc gctgcactac ctcgtgtggc acaaccgcca
241 ccgcgagctg gagaaggagg tccgcgcggg ccaggtggac atcgagcagc tggatccccg
301 cggccggact cccctgcacc tggccaccac gctggggcac cttgagtgtg cccgtgtgct
361 cctggcgcac ggcgcagacg tgggcaggga gaatcgcagc ggctggacag tgctccagga
421 ggctgtgagt acccgggacc tggagctggt gcagctggtg cttcggtacc gggactacca
481 gcgggtggtg aagcggctgg cgggcatccc cgtgctcctg gagaagctgc gcaagcccca
541 ggacttctac gtggagatga aatgggagtt cactagctgg gtgcccctgg tgtccaagat
601 ctgccctagt gacacctaca aagtgtggaa gagcggccag aacctgaggg tagacaccac
661 actcctgggc tttgaccaca tgacctggca gcgagggaac cgcagctttg tcttcagggg
721 ccaagacaca agcgccgtgg tcatggagat tgaccacgac cgccgggtgg tgtacacaga
781 gactctggca ctggctgggc aggaccggga gctgctgctg gctgctgctc agcccactga
841 ggaacaggtg ctgagccggc ttaccgcgcc cgtcgtcacc actcagcttg acaccaagaa
901 tatctccttt gagaggaaca agactggcat cctgggctgg cgcagtgaaa agacggagat
961 ggtgaatggg tatgaagcta aggtgtatgg ggcatctaac gtggagctca tcacccgcac
1021 acggacagaa catctttcag aacatcacaa gggcaaggtc aaaggctgta agacaccttt
1081 gcagtccttc ctgggaatcg ctgagcagca cgggggcccc caaaatggga ccctgatcac
1141 tcagactctg agccaagcca accccactgc catcactgca gaagaatact tcaaccccaa
1201 ctttgagctg ggcaaccgtg atatgggccg ccccatggaa ctgaccacca agacacagaa
1261 gttcaaggcc aagctgtggc tgtgtgagga gcatcccctg tccctgtgtg agcaggtggc
1321 ccccatcatt gacctcatgg ccgtcagcaa tgcgcttttt gccaagctcc gggacttcat
1381 caccctgcgt ctgcctcctg gcttcccagt taagattgaa atcccgatct tccacatcct
1441 caacgcccgc atcaccttcg ggaacctcaa cggctgcgac gaaccggtgc catcggtgcg
1501 aggcagcccc agcagcgaga cgccttcccc aggcagcgac tcctccagcg tcagcagctc
1561 cagctccacg acctcctgcc gcggctgcga gatctcccca gcgttgttcg aggccccgcg
1621 cggctacagc atgatgggcg gccagcggga ggcggcgacc cgggacgacg acgacgacct
1681 gctgcaattc gccatccagc agagcctgct tgaggcgggc agtgagtatg accaggtcac
1741 catctgggag gcgctaacca acagcaagcc aggcacccac cccatgtcct acgagggtcg
1801 ccgacaggac aggagcgccc cgcccacgcc gcagcgccag cctgcgcccc cggcgtcagt
1861 gcccagccct cggcccagct cagggccagg ttccggcggc cacgtgttcc ggagctacga
1921 cgagcagctg cggctggcga tggaactgtc ggcgcaggag caggaggaga ggcggcggcg
1981 cgcgcgccag gaggaggagg agctggagcg catcctgagg ctctcactga ccgagcagta
2041 gcgccccctg ccgggaccct cgccagcgcc acgcgcgcca cgcccagggc caggagccag
2101 acaaaccccg gcctgcgcgc ctgcagagcg gcggctggag actggagcca ccgcctcgcg
2161 ggtgcagcag cacagcaggg agtgtgtcca acgtagcccc ctggcctgtg caagccctga
2221 ctccctcatg gtgcctcgga gagtggggag catattgggc tggggtaagc actagaccca
2281 agtagactgg acacaaaggg ctcgcccagg gccctggcgc cacccccacc ccttcccacc
2341 agctgctgct agcctctgtg gttgtacatc ccacttgccc ccacacggag actgactcta
2401 aaacccttca tccaatggtg ctaacccccg gctctcccct gccccacctc acccacccag
2461 agaagcacag accccgccag gggcaggggc ccaccgcaca cccttgtccc gggcctgtct
2521 gggactggcc ttcccggctc agccagtgag gctcagaagg gacacaaaga gggatggaag
2581 aaaagaacaa agagaaactg ttcctcccac ccccttccct gatgccaggg gcaccagact
2641 gattctgagg cacaaataaa agaggcttca taccggaaaa aaaaaaaaaa aaaa
//