LOCUS BC032501 3119 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 5, group A, member 1, mRNA
(cDNA clone MGC:45252 IMAGE:5227690), complete cds.
ACCESSION BC032501
VERSION BC032501.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24432033.
FEATURES Location/Qualifiers
source 1..3119
/db_xref="H-InvDB:HIT000041571"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45252 IMAGE:5227690"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3119
/gene="NR5A1"
/gene_synonym="AD4BP"
/gene_synonym="ELP"
/gene_synonym="FTZ1"
/gene_synonym="SF-1"
/gene_synonym="SF1"
/db_xref="GeneID:2516"
/db_xref="HGNC:HGNC:7983"
/db_xref="MIM:184757"
CDS 188..1573
/gene="NR5A1"
/gene_synonym="AD4BP"
/gene_synonym="ELP"
/gene_synonym="FTZ1"
/gene_synonym="SF-1"
/gene_synonym="SF1"
/codon_start=1
/product="nuclear receptor subfamily 5, group A, member 1"
/protein_id="AAH32501.1"
/db_xref="GeneID:2516"
/db_xref="HGNC:HGNC:7983"
/db_xref="MIM:184757"
/translation="MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNN
KHYTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRD
RALKQQKKAQIRANGFKLETGPPMGVPPPPPPAPDYVLPPSLHGPEPKGLAAGPPAGP
LGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQPGLPYGYPEPFS
GGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISI
VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELT
TVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKD
AQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNN
LLIEMLQAKQT"
BASE COUNT 592 a 988 c 952 g 587 t
ORIGIN
1 ggaggacgga cggacagggc cagcctgctg tccggctgcc gcccgccgtg gtgtgagggg
61 gtttctgcgc acccacagtc gccaccgtcc cacctgggct gccggagcct ccccctggac
121 ccctggtgcc cactgccacc ctcatccggt gtgagagcgc tgcttccgct tcgcggacgc
181 cgcgggcatg gactattcgt acgacgagga cctggacgag ctgtgccccg tgtgcgggga
241 caaggtgtcc ggctaccact acggactgct cacgtgtgag agctgcaagg gcttcttcaa
301 gcgcacggtg cagaacaaca agcactacac gtgcaccgag agccagagct gcaagatcga
361 caagacgcag cgcaagcgct gtcccttctg ccgcttccag aaatgcctga cggtggggat
421 gcgcctggaa gccgtgcgcg ctgaccgtat gaggggtggc cggaacaagt ttgggccgat
481 gtacaagcgg gaccgggccc tgaaacagca gaagaaggca cagattcggg ccaatggctt
541 caagctggag acagggcccc cgatgggggt gcccccgccg ccccctcccg caccggacta
601 cgtgctgcct cccagcctgc atgggcctga gcccaagggc ctggccgccg gtccacctgc
661 tgggccactg ggcgactttg gggccccagc actgcccatg gccgtgcccg gtgcccacgg
721 gccactggct ggctacctct accctgcctt tcctggccgt gccatcaagt ctgagtaccc
781 ggagccttat gccagccccc cacagcctgg gctgccgtac ggctacccag agcccttctc
841 tggagggccc aacgtgcctg agctcatcct gcagctgctg cagctggagc cggatgagga
901 ccaggtgcgg gcccgcatct tgggctgcct gcaggagccc accaaaagcc gccccgacca
961 gccggcggcc ttcggcctcc tgtgcagaat ggccgaccag accttcatct ccatcgtgga
1021 ctgggcacgc aggtgcatgg tcttcaagga gctggaggtg gccgaccaga tgacgctgct
1081 gcagaactgc tggagcgagc tgctggtgtt cgaccacatc taccgccagg tccagcacgg
1141 caaggagggc agcatcctgc tggtcaccgg gcaggaggtg gagctgacca cagtggccac
1201 ccaggcgggc tcgctgctgc acagcctggt gttgcgggcg caggagctgg tgctgcagct
1261 gcttgcgctg cagctggacc ggcaggagtt tgtctgcctc aagttcatca tcctcttcag
1321 cctggatttg aagttcctga ataaccacat cctggtgaaa gacgctcagg agaaggccaa
1381 cgccgccctg cttgactaca ccctgtgcca ctacccgcac tgcggggaca aattccagca
1441 gctgctgctg tgcctggtgg aggtgcgggc cctgagcatg caggccaagg agtacctgta
1501 ccacaagcac ctgggcaacg agatgccccg caacaacctg ctcatcgaaa tgctgcaagc
1561 caagcagact tgagcctggg ccgggggcgg ggccgggact gggggcggga ctgggggcgg
1621 ggcctgggcg gggccgcagc cacaccgctg gctctgcatg gttcattttc tgatgcccac
1681 cgaggagccc cagccccgtc ccagaggccg ctgcccctga gttctgacac tgtgtgtttg
1741 ggaagtgggt gaggctgggc agggcctggc ggaggtggag tggccactgg cacttgcctg
1801 ctgcttggag tgccccaagg aggtggctgt taaccacccg ccccgccccc tccctgctcc
1861 cagctctctc tcctggagtc tgaagcctgc aggtccgggg aggaggttcg ggattccctg
1921 gtgggcctcg acgtcccttg gatcagaggt catcccttcc tcctctcctg gaaacagaca
1981 gggagaagtt gagcaggtat caactagggg aggagagagg gtctccagtg ttccccccat
2041 agagaccagg agggagagcc tctgttttgt aaactaagga taaccgagtt tgctaaattg
2101 agaggggcta ttgggcccta gaggacacta ggagactggt taggacaaaa agaccttctc
2161 cctagccctt ctaccccacc tgacctctgc aagagggggc attgatacat catcgggaaa
2221 aaactttgct ccaggcatca ctgattccct ctcccaccca aggagaacgt ttggtacaat
2281 cgacatccta gccccaccca gaggtggccc tcccaggctg gtatttatct gcaaggttgt
2341 agtcaagagg tttttctccc cgctttttgt ttttaagctt ctagacactc cttgaaatgt
2401 gtgtgtgatg gagggaaggg gacagatttg aggactgaag ctggggcttg gggattgcca
2461 ctaagtacag ctgatggttt ctccccggac actcgcctac taagtaccct tggggtggtg
2521 ctgggtcatt acttctgagc cccagcccca atccagagaa gcgctgttgc ccgccctcca
2581 cccactaggt gaacagcagg atgccctgtt gggggcttca ggtctctgtg ggtgggaatg
2641 caagtgaact tgggaggggg cacgggcctg tagatcaggg atagcgctgt tgatcccctc
2701 tctgtggctc caacccgttg ggtcccttgc tgcaaaccca tgaagctggc cctcagctcc
2761 ctgaccccct gtcctaggtc atgaaggaca ctctgcaggg tgaagcacca gggagaggcc
2821 tcggctgtct cctgtccccg gcggggtgcc tgctgtccgt cccgctttca tgttactgtt
2881 gcagcttgtg ctgagcctgc ccagttggag gagactgggc acccctgcct cctgcctccc
2941 gcctcccgcc accctgtctc agtacctccc ccccccgccc cctgaaacat gtgcccctgc
3001 caaggccgga gacccacagc cctgaaacga gaagtgccct taaggatcac cccagccccc
3061 acagccctgg aataaatttc gcaattagtt tccaaaaaaa aaaaaaaaaa aaaaaaaaa
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