LOCUS BC032491 1307 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2L 6, mRNA (cDNA clone
MGC:40331 IMAGE:5246109), complete cds.
ACCESSION BC032491
VERSION BC032491.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: p Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38157980.
FEATURES Location/Qualifiers
source 1..1307
/db_xref="H-InvDB:HIT000041566"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40331 IMAGE:5246109"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1307
/gene="UBE2L6"
/gene_synonym="MGC40331"
/gene_synonym="RIG-B"
/gene_synonym="UBCH8"
/db_xref="GeneID:9246"
/db_xref="HGNC:HGNC:12490"
/db_xref="MIM:603890"
CDS 97..558
/gene="UBE2L6"
/gene_synonym="MGC40331"
/gene_synonym="RIG-B"
/gene_synonym="UBCH8"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2L 6"
/protein_id="AAH32491.1"
/db_xref="GeneID:9246"
/db_xref="HGNC:HGNC:12490"
/db_xref="MIM:603890"
/translation="MMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQP
PYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTC
QVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS"
BASE COUNT 342 a 354 c 333 g 278 t
ORIGIN
1 gggggtgggg tccccggggc ggggcggggc gcgctgtgtc gcgggtcgga gctcggtcct
61 gctggaggcc acgggtgcca cacactcggt cccgacatga tggcgagcat gcgagtggtg
121 aaggagctgg aggatcttca gaagaagcct cccccatacc tgcggaacct gtccagcgat
181 gatgccaatg tcctggtgtg gcacgctctc ctcctacccg accaacctcc ctaccacctg
241 aaagccttca acctgcgcat cagcttcccg ccggagtatc cgttcaagcc tcccatgatc
301 aaattcacaa ccaagatcta ccaccccaac gtggacgaga acggacagat ttgcctgccc
361 atcatcagca gtgagaactg gaagccttgc accaagactt gccaagtcct ggaggccctc
421 aatgtgctgg tgaatagacc gaatatcagg gagcccctgc ggatggacct cgctgacctg
481 ctgacacaga atccggagct gttcagaaag aatgccgaag agttcaccct ccgattcgga
541 gtggaccggc cctcctaact catgttctga ccctctgtgc actggatcct cggcatagcg
601 gacggacaca cctcatggac tgaggccaga gccccctgtg gcccattccc cattcatttt
661 tcccttctta ggttgttagt cattagtttg tgtgtgtgtg tggtggaggg aagggagcta
721 tgagtgtgtg tgttgtgtat ggactcactc ccaggttcac ctggccacag gtgcaccctt
781 cccacaccct ttacattccc cagagccaag ggagtttaag tttgcagtta caggccagtt
841 ctccagctct ccatcttaga gagacaggtc accttgcagg cctgcttgca ggaaatgaat
901 ccagcagcca actcgaatcc ccctagggct caggcactga gggcctgggg acagtggagc
961 atatgggtgg gagacagatg gagggtaccc tatttacaac tgagtcagcc aagccactga
1021 tgggaatata cagatttagg tgctaaaccg tttattttcc acggatgagt cacaatctga
1081 agaatcaaac ttccatcctg aaaatctata tgtttcaaaa ccacttgcca tcctgttaga
1141 ttgccagttc ctgggaccag gcctcagact gtgaagtata tatcctccag cattcagtcc
1201 agggggagcc acggaaacca tgttcttgct taagccatta aagtcagaga tgaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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