LOCUS BC032474 2151 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens toll-interleukin 1 receptor (TIR) domain containing
adaptor protein, mRNA (cDNA clone MGC:40573 IMAGE:5216171),
complete cds.
ACCESSION BC032474
VERSION BC032474.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2151)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2151)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547217.
FEATURES Location/Qualifiers
source 1..2151
/db_xref="H-InvDB:HIT000041557"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40573 IMAGE:5216171"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2151
/gene="TIRAP"
/gene_synonym="Mal"
/gene_synonym="wyatt"
/db_xref="GeneID:114609"
/db_xref="HGNC:HGNC:17192"
/db_xref="MIM:606252"
CDS 406..1176
/gene="TIRAP"
/gene_synonym="Mal"
/gene_synonym="wyatt"
/codon_start=1
/product="TIRAP protein"
/protein_id="AAH32474.1"
/db_xref="GeneID:114609"
/db_xref="HGNC:HGNC:17192"
/db_xref="MIM:606252"
/translation="MASSTSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTS
SDASQPTSQDSPLPPSLSSVTSPSLPPTHASDSGSSRWSKDYDVCVCHSEEDLVAAQD
LVSYLEGSTASLRCFLQLRDATPGGAIVSELCQALSSSHCRVLLITPGFLQDPWCKYQ
MLQALTEAPGAEGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQVKEAVMRYLQ
TLSWHLLYHGTPEIGVKLETENPCRASDSHKCDKRYRE"
BASE COUNT 570 a 606 c 535 g 440 t
ORIGIN
1 ccgcgcagcc ctcatcgcaa ctgggcccgc gcgcagatcc accaaagaga aagcagccct
61 gtgccagttg ctctgccagc ctttcacagg agaagtgtca ctagaatact acagccccca
121 caggctctgc tccacagaaa cttaaggctg aaagagtgtc cgccatcagg gacatcctct
181 gtcactacgg ccttacatag gaagtccttc taaagagctg cctgccagct gcccttcccc
241 agatcccgaa tatcctcctg gccaggtgga gcagagaaca gttcctcagc tggtcatgct
301 gagctcatac cctgatggct gctccatgag gtcaagactg ggtctcctcc ctcctccccc
361 ttcaccaatg cctggtctca cggggctagt tttgaccccc acgctatggc atcatcgacc
421 tccctcccag ctcctggctc tcggcctaag aagcctctag gcaagatggc tgactggttc
481 aggcagaccc tgctgaagaa gcccaagaag aggcccaact ccccagaaag cacctccagc
541 gatgcttcac agcctacctc acaggacagc ccactacccc caagcctcag ctcagtcacg
601 tctcccagcc tgccacccac acatgcgagt gacagtggca gtagtcgctg gagcaaagac
661 tatgacgtct gcgtgtgcca cagtgaggaa gacctggtgg ccgcccagga cctggtctcc
721 tacttggaag gcagcactgc cagcctgcgc tgcttcctgc aactccggga tgcaacccca
781 ggcggcgcta tagtgtccga gctgtgccag gcactgagca gtagtcactg ccgggtgctg
841 ctcatcacgc cgggcttcct tcaggacccc tggtgcaagt accagatgct gcaggccctg
901 accgaggctc caggggccga gggctgcacc atccccctgc tgtcgggcct cagcagagct
961 gcctacccac ctgagctccg attcatgtac tacgtcgatg gcaggggccc tgatggtggc
1021 tttcgtcaag tcaaagaagc tgtcatgcgt tatctgcaga cactcagttg gcacttgtta
1081 tatcatggga ccccggaaat tggagtgaag ctagaaacag aaaacccatg cagggcctcg
1141 gattcccaca aatgtgacaa gaggtatagg gagtgagtcg cagcgctttg ctcgtgaccc
1201 tgggatcaga gcacccatca ggcttccatt actgtgggct ccctaagaag accatggaga
1261 gcttggggac tcccccagga aggccgtgaa gctggggatt ccccctagga aagccatgag
1321 gaagctgggg actccccaag aaggccatga ggaagccaga aattggaggt ggtaggaagt
1381 ggtactgatc aatgatggcc agcaggactc atctcctgcc taactggaca ggaagcctgg
1441 cacccacttc tgtcttcccc tggaactggg cactggcgta cactggtatc cctcctaaag
1501 aagtgactca cctgactgat cagcaagaag cctagattgc aggcctcacc atggatggtc
1561 ttcctagttg cctggggaaa ccctggaatg ggcatcagga gaaagcaaca agaatccagt
1621 ccttcacact cacactactc tgttcctctt cccagagaca tcgattcact tcaaagagct
1681 gtagggaaga tgcagtcagc actgcactgt attttttatt tattgcctag gtgccattaa
1741 agacacaaac ctagaagcct agaggccatt ctgaatatgg gggtggggtg gtggagggag
1801 caagtgaaga gatgggaatc cagggctcag ggttcaacgc cttcacctga gatcacaagc
1861 ccatggatgc tgtgacatct gggagcttca tcagtggtct ggctaaagct gatactttca
1921 cagtcaccat cttcaccttt ggactgggaa gaatcaccat ttttcttctg gcagatgact
1981 gtattcctta taggacaggc aaggtttcat tcatctgttc tcagtaagtt tgttgttgaa
2041 ctgaaatgaa tttcattatt tcctccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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