LOCUS BC032462 1493 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens vacuolar protein sorting 29 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:40428 IMAGE:5197243), complete cds.
ACCESSION BC032462
VERSION BC032462.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1493)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1493)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1493
/db_xref="H-InvDB:HIT000041551"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40428 IMAGE:5197243"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1493
/gene="VPS29"
/gene_synonym="DC15"
/gene_synonym="DC7"
/gene_synonym="DKFZp564F0223"
/gene_synonym="PEP11"
/db_xref="GeneID:51699"
/db_xref="HGNC:HGNC:14340"
/db_xref="MIM:606932"
CDS 75..566
/gene="VPS29"
/gene_synonym="DC15"
/gene_synonym="DC7"
/gene_synonym="DKFZp564F0223"
/gene_synonym="PEP11"
/codon_start=1
/product="VPS29 protein"
/protein_id="AAH32462.1"
/db_xref="GeneID:51699"
/db_xref="HGNC:HGNC:14340"
/db_xref="MIM:606932"
/translation="MVRAAVAATKAWLSGGVLRCWEPWGGRGRGIGKSRRPRRQGPGA
GLGKAQKRSREGRERPPLGAAGLGLVSRPQGARGHPRGKKAPLAARPVTRHARPSQGR
PLVLYLECSGDRGTVLRFQTVPTRFPQKAPPAGWGVVVEAGLSDAEQEVASRISYPFN
FAI"
BASE COUNT 403 a 371 c 401 g 318 t
ORIGIN
1 gtgggcgggt cgccgaggag cctgaggaag agggcggcga cggtggtggt gactgagcgg
61 agcccggtga caggatggtg agggctgcag ttgcggcgac caaggcctgg ctctcgggtg
121 gggtgctgcg ttgttgggag ccgtggggag gccgagggcg aggaattggg aaatcccgga
181 ggcctcggcg tcagggccca ggcgctggcc tgggaaaggc ccagaagagg tctagggaag
241 gaagggagcg gccacctctg ggtgcggctg gcctaggtct cgtatcccgg ccccaagggg
301 ccagaggcca tccaaggggt aaaaaggccc ctctagcagc ccgacctgtc acgagacacg
361 cacgcccgag ccagggaagg cctttggtcc tatacctcga atgttccggg gataggggca
421 cggtcctccg tttccagacg gttcctactc gtttcccgca aaaagcacct cccgctggtt
481 ggggtgtagt ggtggaagct ggcctctcgg atgcagaaca ggaagtagcg agcagaattt
541 cgtacccgtt taactttgcc atctagggaa agggaataaa ccaccctcct cgctcctgaa
601 ataacatcta gctgccattg agatgagcag gtgtgctctc agagggcggg atttggcgct
661 tgcaattgct ggaactgttt ctttccacgg gttgctacgc ctctttaggg taggattcct
721 taatgatgtg tgaactcatt gaaactgttg ggaaattttt gtgaatatac acatttttct
781 ggggagagtg ccggtgttgg agacttacct agtctccccc agccaccttc aagcaatcac
841 cccttcaccc ccagtagttt ggtgcccctc agaccttcct acataaaaac tgggggcctc
901 tactagagag gactcagagc tgtaatcata ttttctttct ttctttttga gatggagtct
961 cgctctgtcg cccaggctgg agtgcaatgc cgcgatctcg gctcactgca atgccgcccg
1021 ggttcaagcc tcagctcctg cctcagcctc ccgagtagct gggattacag gcgcccgcca
1081 ccaagcccgt ctaaattttt gtatttttag tagagacggg gtttcaccat gttggtcagg
1141 ctggtctcta cctcccgacc tcagatgatc cacccgcctc ggcctcccaa agtgctgggg
1201 ttacaggcgt gagccaccgc gcccggcctg taatcatatt ttcaaaggtg cctttgactc
1261 ttaaaaagtc aattgtttgg ggcaacccac tcgggtcccc ttccaccctg tgtaagcttt
1321 gttctttcgc tcttcacaat aaatcttgct gctgctcaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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