LOCUS BC032135 1218 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA pseudouridylate synthase domain containing 3, mRNA
(cDNA clone MGC:29784 IMAGE:4649090), complete cds.
ACCESSION BC032135
VERSION BC032135.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1218)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1218)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC032135.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851448.
FEATURES Location/Qualifiers
source 1..1218
/db_xref="H-InvDB:HIT000041439"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29784 IMAGE:4649090"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1218
/gene="RPUSD3"
/gene_synonym="MGC29784"
/db_xref="GeneID:285367"
/db_xref="HGNC:HGNC:28437"
CDS 3..1034
/gene="RPUSD3"
/gene_synonym="MGC29784"
/codon_start=1
/product="RNA pseudouridylate synthase domain containing
3"
/protein_id="AAH32135.1"
/db_xref="GeneID:285367"
/db_xref="HGNC:HGNC:28437"
/translation="MDGRRVLGRFWSGWRRGLGVRPVPEDAGFGTEARHQRQPRGSCQ
RSGPLGDQPFAGLLPKNLSREELVDALRAAVVDRKGPLVTLNKPQGLPVTGKPGELTL
FSVLPELSQSLGLREQELQVVRASGKESSGLVLLSSCPQTASRLQKYFTHARRAQRPT
ATYCAVTDGIPAASEGKIQAALKLEHIDGVNLTVPVKAPSRKDILEGVKKTLSHFRVV
ATGSGCALVQLQPLTVFSSQLQVHMVLQLCPVLGDHMYSARVGTVLGQRFLLPAENNK
PQRQVLDEALLRRLHLTPSQAAQLPLHLHLHRLLLPGTRARDTPVELLAPLPPYFSRT
LQCLGLRLQ"
BASE COUNT 261 a 382 c 336 g 239 t
ORIGIN
1 agatggacgg ccgccgtgtt ttgggccggt tctggagtgg ctggcggcgg ggcctgggtg
61 tccgcccagt gcccgaggac gcaggctttg gcaccgaagc ccggcatcag aggcaacccc
121 gcggctcctg ccaacggtcg gggcccctcg gggaccagcc cttcgcgggg ctgctgccaa
181 aaaacctcag tcgggaggag ctggttgatg cgctgcgggc agccgtggtg gaccggaaag
241 gacctctagt gacgttgaac aagccacagg gtctaccagt gacaggaaaa ccaggagagc
301 tgacgttgtt ctcagtgctg ccagagctga gccagtccct agggctcagg gagcaggagc
361 ttcaggttgt ccgagcatct gggaaagaaa gctctgggct tgtactcctc tccagctgtc
421 cccagacagc tagtcgcctc cagaagtact tcacccatgc acggagagcc caaaggccca
481 cagccaccta ctgtgctgtc actgatggga tcccagctgc ttctgagggg aagatccagg
541 ctgccctgaa actggaacac attgatgggg tcaatctcac agttccagtg aaggccccat
601 cccgaaagga catcctggaa ggtgtcaaga agactctcag tcactttcgt gtggtagcca
661 caggctctgg ctgtgccctg gtccagctgc agccactgac agtgttctcc agtcaactac
721 aggtgcacat ggtactacag ctctgccctg tgcttgggga ccacatgtac tctgcccgtg
781 tgggcactgt cctgggccag cgatttctgc tgccagctga gaacaacaag ccccaaagac
841 aggtcctgga tgaagccctc ctcagacgcc tccacctgac cccctcccag gctgcccagc
901 tgcccttgca cctccaccta catcggctcc ttctcccagg caccagggcc agggacaccc
961 ctgttgagct cctggcacca ctgccccctt atttctccag gaccctacag tgcctggggc
1021 tccgcttaca atagtcctcc ctctgttcct gaccccctca cacacactgg aaagtgaggg
1081 tgggggctct gcagtcagac aaacctaaga tcacatcctg gacaggccac ttgcttgctg
1141 tgtggcattg ggcaagtaac tttacctctc tggacttgtg ataataaaag ttcctacctc
1201 aaaaaaaaaa aaaaaaaa
//