LOCUS BC032108 2904 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens vacuolar protein sorting 52 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:23328 IMAGE:4644275), complete cds.
ACCESSION BC032108
VERSION BC032108.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2904)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2904)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: e Column: 18.
FEATURES Location/Qualifiers
source 1..2904
/db_xref="H-InvDB:HIT000041421_07"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23328 IMAGE:4644275"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2904
/gene="VPS52"
/gene_synonym="ARE1"
/gene_synonym="dJ1033B10.5"
/gene_synonym="DKFZp547I194"
/gene_synonym="RP5-1033B10"
/gene_synonym="SAC2"
/db_xref="GeneID:6293"
/db_xref="HGNC:HGNC:10518"
/db_xref="MIM:603443"
CDS 153..2324
/gene="VPS52"
/gene_synonym="ARE1"
/gene_synonym="dJ1033B10.5"
/gene_synonym="DKFZp547I194"
/gene_synonym="RP5-1033B10"
/gene_synonym="SAC2"
/codon_start=1
/product="vacuolar protein sorting 52 homolog (S.
cerevisiae)"
/protein_id="AAH32108.1"
/db_xref="GeneID:6293"
/db_xref="HGNC:HGNC:10518"
/db_xref="MIM:603443"
/translation="MAAAATMAAAARELVLRAGTSDMEEEEGPLAGGPGLQEPLQLGE
LDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDY
IQESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRN
RQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTA
ACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGN
ERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFS
KPSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDN
SCREYLFICEFFVVSGPAAHDLFHAVMGRTLSMTLKHLDSYLADCYDAIAVFLCIHIV
LRFRNIAAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHY
ITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLIN
NYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIE
RGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLI
QLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF"
BASE COUNT 685 a 763 c 756 g 700 t
ORIGIN
1 ttagagctga aaggggacag ctggagtcaa acaacttaac tcaaatatct gggaacgatt
61 tcgcgctgag gaagaccctt tgggacttgt agctccactc cggggaacgg actcgccggg
121 actgacagtt gccggaagtg aggctgcggg gaatggccgc cgctgcgacc atggcggctg
181 cggcccggga actggtgttg cgggctggga cctcagatat ggaggaggaa gagggcccgc
241 tggcgggtgg tcctgggctc caggaaccac tgcaacttgg ggagttggat atcacttctg
301 atgaattcat cctggatgaa gtggatgttc acattcaggc aaatctggag gatgagttag
361 taaaggaagc tcttaaaacg ggtgtagatc tccgtcacta ttcaaagcaa gttgagctgg
421 agctacagca gattgaacag aaatccattc gggattatat tcaagagagt gagaatatag
481 catctctaca caaccagatc acagcctgtg atgctgtcct ggagcgaatg gagcagatgt
541 tgggagcttt tcagagtgac ctcagctcca tcagctctga gatccggaca ctgcaggaac
601 agtcaggagc catgaacatt cgacttcgaa atcgccaggc agttcggggg aaacttgggg
661 agcttgttga tggtctggtg gtgccttctg ctctggtcac ggcaattctg gaggctccag
721 tgacagagcc caggttcttg gagcagctac aggagctgga tgccaaggca gccgcagtca
781 gagagcagga agctagaggc acagcagcct gcgcagatgt cagaggcgtg ctcgatcggc
841 tccgggtcaa ggcagtgacg aagatccgag agtttatcct ccagaagatt tattccttca
901 ggaaacccat gaccaactat cagatccccc agacggccct gctgaagtac aggttcttct
961 atcagtttct gctgggcaat gaacgagcaa cagcaaagga gatcagggat gaatatgtgg
1021 agacgctgag caagatttac ctgtcttact accgctctta cctggggcgg ctcatgaagg
1081 tgcagtatga ggaagtcgct gagaaagatg atctaatggg tgtggaagat acagcaaaga
1141 aaggattctt ctcaaagcca tcgctccgca gcaggaacac cattttcacc ctaggaaccc
1201 gcggctctgt catctccccc actgaacttg aggcccccat cctggtgcct cacacagcgc
1261 agcgcggaga gcagaggtat ccatttgagg ccctcttccg cagccagcac tacgccctcc
1321 tagacaattc ctgccgcgaa taccttttca tctgtgaatt ttttgttgtg tctggcccag
1381 ctgcacacga cctgttccat gctgtcatgg gccgtacact cagcatgacc ctgaaacacc
1441 tggattctta tctagctgac tgctacgatg ccattgctgt ttttctctgt atccacattg
1501 ttctccggtt ccgtaacatt gcagcaaaga gggatgttcc tgccctggac aggtactggg
1561 aacaggtgct tgccttgcta tggccacggt ttgaactgat cctggagatg aatgttcaga
1621 gcgtccgaag cactgacccc cagcgcctag gggggttgga tactcggccc cactatatca
1681 cacgccgcta tgcagagttc tcctccgctc ttgtcagtat caaccagaca attcctaatg
1741 aacggaccat gcaattgctg ggacagctgc aggtggaggt ggagaatttt gtcctccgag
1801 tggcagctga gttctcctca aggaaggagc agcttgtgtt tctgatcaac aactatgaca
1861 tgatgctggg tgtgctgatg gagcgggctg cagatgacag caaagaggtt gagagcttcc
1921 agcagctgct caatgctcgg acacaggaat tcattgaaga gttgctgtct cccccttttg
1981 ggggtttagt ggcatttgtg aaggaggctg aggctttgat tgagcgtgga caggctgagc
2041 gacttcgagg ggaagaagcc cgggtaactc agctgatccg tggctttggt agttcctgga
2101 aatcatcagt ggaatctctg agtcaggatg taatgcggag tttcaccaac ttcagaaatg
2161 gcaccagtat cattcaggga gcgctgaccc agctgatcca gctctatcat cgcttccacc
2221 gggtgctgtc ccagccgcag ctccgagccc tccctgcccg ggctgagctc atcaacattc
2281 accaccttat ggtggagctc aagaagcata agcccaactt ctgatgtgcc agaaaccgcc
2341 ctgagatctg ccggtcatct ccatggactt ctgcacccca ttccataccc ttcttcacct
2401 ggggtacccc ttccagtttt ccccttgctt cccaggccct tgacatggct tacctgcctt
2461 cactcccagc accttgccca acaggataag ctggatcccc ttggccttct gaatatccca
2521 gtgtcttcag gtttcccaag accacttccc tgtgggcttc caaaatggcc tttatcattt
2581 ctccagtctg tcaccctcct ttcctgctcc catacaccca aggcttgttt cttcccctgt
2641 aaaaaccact gcctcaatct ctggttcact caactagtca ccatgtcctg aggcatgaag
2701 cctcctcagc tcttggaatt gctggcaagg ggtgactgcc tctgagtcat tgtgtttttc
2761 agagtgattt cttttctgta gctttttgac ctaagatctc agcaatttga acactaacct
2821 ctcccctcct ggctcaagaa ttactccgaa gtcagtctgc agaaaataaa tatttagtat
2881 gacatgaaaa aaaaaaaaaa aaaa
//