LOCUS BC031995 1092 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens major histocompatibility complex, class II, DQ beta 2,
mRNA (cDNA clone IMAGE:4747201).
ACCESSION BC031995
VERSION BC031995.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1092)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1092)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33438593
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..1092
/db_xref="H-InvDB:HIT000041399_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4747201"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
BASE COUNT 264 a 311 c 283 g 234 t
ORIGIN
1 tctcacttat gtcttggaag atggctctgc agatccctgg aggcttttgg gcagcagctg
61 tgaccgtgat gctggtgatg ctgagcaccc cagtggctga ggccagagac tttcccaagg
121 atttcttggt ccagtttaag ggcatgtgct acttcaccaa cgggacagag cgcgtgcggg
181 gtgtggccag atacatctat aaccgcgagg agtacgggcg cttcgacagc gacgttgggg
241 agttccaggc ggtgaccgag ctggggcgga gcatcgagga ctggaacaac tataaggact
301 tcttggagca ggagcgggcc gcggtggaca aggtgtgcag acacaactac gaggcggagc
361 tacgcacgac cttgcagcgg caagtggagc ccacagtgac catctcccca tccaggacag
421 aggccctcaa ccaccacaac ctgctggtct gctcagtgac agatttctat ccagcccaga
481 tcaaagtcca gtggtttcgg aatgaccagg aggagacagc cggtgttgtg tccacctccc
541 tcattaggaa tggtgactgg accttccaga ttctggtgat gctggaaata actccccagc
601 gtggagacat ctacacctgc caagtggagc accccagcct ccagagcccc atcaccgtgg
661 agtggcgacc tcgagggcct ccacctgcag gactcctgca ctgactcctg aggacttttg
721 tctgggattg gtcatcactc ttctgtaatg cccacctgcc cctgcccaga attcctagct
781 gcctgtgtca tcctgtccca ctgaggtcag agtcctacag tggctcatgc agccacaggt
841 caccttctgt gatccccatc ccaaggcact ggcggtgact ctgcttcctg tactgaccca
901 gagcctctgc ctgtgcactg caagctgtgt ctactcaggc cccaaggggc atctctgttt
961 ccattctccc cccacagacc tgtcaagaga agcatgacaa acaaaatcat ttacctaact
1021 ttagtgcttt ttcccataat taaacctgat tctgagttaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aa
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