LOCUS BC031878 1787 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens haloacid dehalogenase-like hydrolase domain containing
3, mRNA (cDNA clone MGC:34125 IMAGE:4747097), complete cds.
ACCESSION BC031878
VERSION BC031878.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1787)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1787)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377665.
FEATURES Location/Qualifiers
source 1..1787
/db_xref="H-InvDB:HIT000051045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34125 IMAGE:4747097"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1787
/gene="HDHD3"
/gene_synonym="2810435D12Rik"
/gene_synonym="MGC12904"
/db_xref="GeneID:81932"
/db_xref="HGNC:HGNC:28171"
CDS 785..1540
/gene="HDHD3"
/gene_synonym="2810435D12Rik"
/gene_synonym="MGC12904"
/codon_start=1
/product="haloacid dehalogenase-like hydrolase domain
containing 3"
/protein_id="AAH31878.1"
/db_xref="GeneID:81932"
/db_xref="HGNC:HGNC:28171"
/translation="MAHRLQIRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSA
LEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLY
KDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTS
EAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALD
PVVRDSVPKEHILPSLAHLLPALDCLEGSTPGL"
BASE COUNT 417 a 498 c 471 g 401 t
ORIGIN
1 aaaaaaaaaa aaaagccgtg ggtcaggagc cagagccctc tgctctagtc ttagctgtgc
61 caatgtgact ccctgtgtga tttgggggta aattactgcc cctcactggg tctctgtcta
121 cccacctgca aaatgagagg atctttggat gagtctcctt aattcatttc ctggacaaac
181 ttcctccaag gctcccccag atttatcagt gacgcccttc cctaagtatc aacttagccg
241 tactttgaac tctggcccct caggtttcaa ggggacggcc ttgtctggga tcagctctgt
301 ctggggaaag aagctgcacc agcctctgga tagcaggctg agtcacttgt ttcttgtgcc
361 ttgagtcagt tctctcatca gctctcctcc taggccagtg ttattacctc cagtaaagat
421 ggaaaagttg gggttcagag agggctagag acagacagcc tgctgtgtcc tgtcttttct
481 cctgtgctgt acaggttcac caatttttaa aatccaaata tatctcatgg tacagtggaa
541 gaactggcca gagagtctgg aagtttgggt tctggtcctg gctgtgccac tgactcactg
601 tgaccttggg atcttgtgct gtgaagacat ttcccaagtg cttcatgtta gccagcaaat
661 ctgacccaca aggcctggaa agaggtgatt gttaggttgc gcagaggtgg tcttatccag
721 ctcagcttcc cctgggaccc accgtgggac ctgaggcaga actggggtgg acttggcctc
781 ctccatggca caccggctgc agatacgact gctgacgtgg gatgtgaagg acacgctgct
841 caggctccgc caccccttag gggaggccta tgccaccaag gcccgggccc atgggctgga
901 ggtggagccc tcagccctgg aacaaggctt caggcaggca tacagggctc agagccacag
961 cttccccaac tacggcctga gccacggcct aacctcccgc cagtggtggc tggatgtggt
1021 cctgcagacc ttccacctgg cgggtgtcca ggatgctcag gctgtagccc ccatcgctga
1081 acagctttat aaagacttca gccacccctg cacctggcag gtgttggatg gggctgagga
1141 caccctgagg gagtgccgca cacggggtct gagactggca gtgatctcca actttgaccg
1201 acggctagag ggcatcctgg ggggccttgg cctgcgtgaa cacttcgact ttgtgctgac
1261 ctccgaggct gctggctggc ccaagccgga cccccgcatt ttccaggagg ccttgcggct
1321 tgctcatatg gaaccagtag tggcagccca tgttggggat aattacctct gcgattacca
1381 ggggcctcgg gctgtgggca tgcacagctt cctggtggtt ggcccacagg cactggaccc
1441 cgtggtcagg gattctgtac ctaaagaaca catcctcccc tctctggccc atctcctgcc
1501 tgcccttgac tgcctagagg gctcaactcc agggctttga ggccagtgag ggaagtggct
1561 gggccctagg ccatggagaa aaccttaaac aaaccctgga gacagggagc cccttctttc
1621 tccacagctc tggacctttc cccctctccc tgcggccttt gtcacctact gtgataataa
1681 agcagtgagt gctgagctct cacccttccc ccactaacca gaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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