LOCUS BC031413 1757 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens 4-aminobutyrate aminotransferase, mRNA (cDNA clone
MGC:35480 IMAGE:5195212), complete cds.
ACCESSION BC031413
VERSION BC031413.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1757)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1757)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: m Column: 21.
FEATURES Location/Qualifiers
source 1..1757
/db_xref="H-InvDB:HIT000041297"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35480 IMAGE:5195212"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1757
/gene="ABAT"
/gene_synonym="GABA-AT"
/gene_synonym="GABAT"
/gene_synonym="NPD009"
/db_xref="GeneID:18"
/db_xref="HGNC:HGNC:23"
/db_xref="MIM:137150"
CDS 119..1621
/gene="ABAT"
/gene_synonym="GABA-AT"
/gene_synonym="GABAT"
/gene_synonym="NPD009"
/codon_start=1
/product="4-aminobutyrate aminotransferase"
/protein_id="AAH31413.1"
/db_xref="GeneID:18"
/db_xref="HGNC:HGNC:23"
/db_xref="MIM:137150"
/translation="MASMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGP
LMKTEVPGPRSRELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISS
VPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLIT
MACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFH
GRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDL
IVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGC
TGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLL
AEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIR
NKLILIARNKGVVLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADFK"
BASE COUNT 448 a 473 c 471 g 365 t
ORIGIN
1 gccggaactc ggggcgcgca tcccgcaagt cggaacccgg cggatcggat cccgcagatc
61 ggagacgggg cctggagggt ggcagcacgc aaagggtgtc cctgtccctc aaggggtcat
121 ggcctccatg ttgctcgccc agcgcctggc ctgcagcttc cagcacagct accgcctgct
181 ggtgcctgga tccagacaca ttagtcaagc tgcagccaaa gtcgacgttg aatttgatta
241 tgatgggcct ctgatgaaga cggaagtccc agggcctaga tctcgggagt taatgaaaca
301 gctgaatata attcagaatg cagaggctgt gcattttttc tgcaattacg aagagagccg
361 aggcaattac ctggttgatg tggacggcaa ccgaatgctg gatctttatt cccagatctc
421 ctctgtcccc ataggttaca gccaccccgc cctgctgaaa ctcatccaac agcctcaaaa
481 tgcgagcatg tttgtcaaca gacccgccct cggaatcctg cctccggaga actttgtgga
541 gaagctccgg cagtccttgc tctcggtggc tcccaaaggg atgtcccagc tcatcaccat
601 ggcctgcggc tcctgctcca atgaaaacgc cttaaagacc atcttcatgt ggtaccggag
661 caaggaaaga gggcagaggg gcttctccca ggaggagctg gagacgtgca tgattaacca
721 ggcccctggc tgccccgact acagcatcct ctccttcatg ggcgcgttcc atgggaggac
781 catgggttgc ttagcgacca cgcactctaa agccattcac aagatcgaca tcccttcctt
841 tgactggccc atcgcaccgt tcccacggct gaaataccct ctggaagagt ttgtgaaaga
901 gaaccaacag gaggaggccc gctgtctgga agaggtggag gatctgattg tgaaatatcg
961 gaaaaagaag aagacggtgg ccgggatcat cgtggagccc atccagtccg agggtggaga
1021 caaccacgca tccgatgact tctttcggaa gctgagagac atcgccagga agcatggctg
1081 cgccttcttg gtggacgagg tacagaccgg aggaggctgc acgggcaagt tctgggccca
1141 tgagcactgg ggcctggatg acccagcaga cgtgatgacc ttcagcaaga aaatgatgac
1201 tgggggcttc ttccacaagg aggagttcag gcctaatgct ccctaccgga tcttcaacac
1261 ctggctgggg gacccgtcca agaacctgtt gctggctgag gtcatcaaca tcatcaagcg
1321 ggaggacctg ctaaataatg cagcccatgc cgggaaggcc ctgctcacag gactgctgga
1381 cctccaggcc cggtaccccc agttcatcag cagggtgaga ggacgaggca ccttttgctc
1441 cttcgatact cccgatgatt ccatacggaa taagctcatt ttaattgcca gaaacaaagg
1501 tgtggtgttg ggtggctgtg gtgacaaatc cattcgtttc cgtcccacgc tggtcttcag
1561 ggatcaccac gctcacctgt tcctcaatat tttcagtgac atcttagcag acttcaagta
1621 aagaagccat ttccactaca gtgagaaagc ccggatccca acagttgtca aattgattag
1681 tttgcctaat tcatgttttc acttaaaagt atcagaggtg aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaa
//