LOCUS BC031412 2251 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hyaluronan binding protein 2, mRNA (cDNA clone
MGC:34485 IMAGE:5187066), complete cds.
ACCESSION BC031412
VERSION BC031412.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2251)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2251)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20302151.
FEATURES Location/Qualifiers
source 1..2251
/db_xref="H-InvDB:HIT000041296"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34485 IMAGE:5187066"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2251
/gene="HABP2"
/gene_synonym="FSAP"
/gene_synonym="HABP"
/gene_synonym="HGFAL"
/gene_synonym="PHBP"
/db_xref="GeneID:3026"
/db_xref="HGNC:HGNC:4798"
/db_xref="MIM:603924"
CDS 81..1763
/gene="HABP2"
/gene_synonym="FSAP"
/gene_synonym="HABP"
/gene_synonym="HGFAL"
/gene_synonym="PHBP"
/codon_start=1
/product="hyaluronan binding protein 2"
/protein_id="AAH31412.1"
/db_xref="GeneID:3026"
/db_xref="HGNC:HGNC:4798"
/db_xref="MIM:603924"
/translation="MFARMSDLHVLLLMALVGKTACGFSLMSLLESLDPDWTPDQYDY
SYEDYNQEENTSSTLTHAENPDWYYTEDQADPCQPNPCEHGGDCLVHGSTFTCSCLAP
FSGNKCQKVQNTCKDNPCGRGQCLITQSPPYYRCVCKHPYTGPSCSQVVPVCRPNPCQ
NGATCSRHKRRSKFTCACPDQFKGKFCEIGSDDCYVGDGYSYRGKMNRTVNQHACLYW
NSHLLLQENYNMFMEDAETHGIGEHNFCRNPDADEKPWCFIKVTNDKVKWEYCDVSAC
SAQDVAYPEESPTEPSTKLPGFDSCGKTEIAERKIKRIYGGFKSTAGKHPWQASLQSS
LPLTISMPQGHFCGGALIHPCWVLTAAHCTDIKTRHLKVVLGDQDLKKEEFHEQSFRV
EKIFKYSHYNERDEIPHNDIALLKLKPVDGHCALESKYVKTVCLPDGSFPSGSECHIS
GWGVTETGKGSRQLLDAKVKLIANTLCNSRQLYDHMIDDSMICAGNLQKPGQDTCQGD
SGGPLTCEKDGTYYVYGIVSWGLECGKRPGVYTQVTKFLNWIKATIKSESGF"
BASE COUNT 626 a 609 c 533 g 483 t
ORIGIN
1 ctgacatttt tcccccctaa aggcatagac aacaaaagaa attttattga gaggaaaaca
61 caagtcctta aactgcaaag atgtttgcca ggatgtctga tctccatgtt ctgctgttaa
121 tggctctggt gggaaagaca gcctgtgggt tctccctgat gtctttattg gaaagcctgg
181 acccagactg gacccctgac cagtatgatt acagctacga ggattataat caggaagaga
241 acaccagtag cacacttacc cacgctgaga atcctgactg gtactacact gaggaccaag
301 ctgatccatg ccagcccaac ccctgtgaac acggtgggga ctgcctcgtc catgggagca
361 ccttcacatg cagctgcctg gctcctttct ctgggaataa gtgtcagaaa gtgcaaaata
421 cgtgcaagga caacccatgt ggccggggcc aatgtctcat tacccagagt cctccctact
481 accgctgtgt ctgtaaacac ccttacacag gtcccagctg ctcccaagtg gttcctgtat
541 gcaggccaaa cccctgccag aatggggcta cctgctcccg gcataagcgg agatccaagt
601 tcacctgtgc ctgtcccgac cagttcaagg ggaaattctg tgaaataggt tctgatgact
661 gctatgttgg cgatggctac tcttaccgag ggaaaatgaa taggacagtc aaccagcatg
721 cgtgccttta ctggaactcc cacctcctct tgcaggagaa ttacaacatg tttatggagg
781 atgctgaaac ccatgggatt ggggaacaca atttctgcag aaacccagat gcggacgaaa
841 agccctggtg ctttattaaa gttaccaatg acaaggtgaa atgggaatac tgtgatgtct
901 cagcctgctc agcccaggac gttgcctacc cagaggaaag ccccactgag ccatcaacca
961 agcttccggg gtttgactcc tgtggaaaga ctgagatagc agagaggaag atcaagagaa
1021 tctatggagg ctttaagagc acggcgggca agcacccatg gcaggcgtcc ctccagtcct
1081 cgctgcctct gaccatctcc atgccccagg gccacttctg tggtggggcg ctgatccacc
1141 cctgctgggt gctcactgct gcccactgca ccgacataaa aaccagacat ctaaaggtgg
1201 tgctagggga ccaggacctg aagaaagaag aatttcatga gcagagcttt agggtggaga
1261 agatattcaa gtacagccac tacaatgaaa gagatgagat tccccacaat gatattgcat
1321 tgctcaagtt aaagccagtg gatggtcact gtgctctaga atccaaatac gtgaagactg
1381 tgtgcttgcc tgatgggtcc tttccctctg ggagtgagtg ccacatctct ggctggggtg
1441 ttacagaaac aggaaaaggg tcccgccagc tcctggatgc caaagtcaag ctgattgcca
1501 acactttgtg caactcccgc caactctatg accacatgat tgatgacagt atgatctgtg
1561 caggaaatct tcagaaacct gggcaagaca cctgccaggg tgactctgga ggccccctga
1621 cctgtgagaa ggacggcacc tactacgtct atgggatagt gagctggggc ctggagtgtg
1681 ggaagaggcc aggggtctac acccaagtta ccaaattcct gaattggatc aaagccacca
1741 tcaaaagtga aagtggcttc taaggtactg tcttctggac ctcagagccc actctccttg
1801 gcaccctgac accgggaggc ctcatggcca acaatggaca cctccagagc ctccagggga
1861 ccacacagta gactatccct actctaagca gagacaactg ccacccagcc tgggccttcc
1921 cagaccagca tttgcacaat atcaccaggc ttcttctgcc tcccttggta acccaaggaa
1981 tgatggaatc aacacaacat agtatgtttg ctttccttac ccaattgtac cttctagaaa
2041 atcagtgttc acagagactg ccttcaccac aggcatcctg caaatgcaga ctccagaatc
2101 cccagcatca gcgggaacca ccatcacatc tttattcctc agcccagaca ctcgaggcac
2161 tcaacagaat cagccatcca cgtctaggta tcagagagga ccacaaatac aacattctcc
2221 atctgcaaaa aaaaaaaaaa aaaaaaaaaa a
//