LOCUS BC031333 890 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens histone cluster 1, H3d, mRNA (cDNA clone MGC:45668
IMAGE:3608479), complete cds.
ACCESSION BC031333
VERSION BC031333.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39812261.
FEATURES Location/Qualifiers
source 1..890
/db_xref="H-InvDB:HIT000041284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45668 IMAGE:3608479"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..890
/gene="HIST1H3D"
/gene_synonym="H3/b"
/db_xref="GeneID:8351"
/db_xref="HGNC:HGNC:4767"
/db_xref="MIM:602811"
CDS 374..784
/gene="HIST1H3D"
/gene_synonym="H3/b"
/codon_start=1
/product="histone cluster 1, H3d"
/protein_id="AAH31333.1"
/db_xref="GeneID:8351"
/db_xref="HGNC:HGNC:4767"
/db_xref="MIM:602811"
/translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRP
GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLV
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
BASE COUNT 210 a 267 c 253 g 160 t
ORIGIN
1 cccgagctaa ggctaagacc cgctcttcgc gggccggact ccagttccct gtgggccgcg
61 tacaccgctt gctccgcaag ggcaactact ccgagcgagt cggggccggc gcgccagtgt
121 atctggcggc ggtgttggag tacctgaccg ccgagatcct ggagctggcg ggcaacgccg
181 cccgcgacaa caagaagacc cgcatcatcc cccgacactt gcagctggcc atccgcaacg
241 acgaggagct aaacaagttg ctgggtaaag tcacaattgc tcagggcggt gttctgccca
301 acatccaggc tgtactgctc cccaagaaga ctgagagtca ccacaaggcc aaggcaggtt
361 ttagaagttc gcaatggctc gtaccaagca gactgctcgc aagtccacgg gtgggaaagc
421 gccacgcaag cagctggcca ccaaggctgc tcgaaagagc gctccagcca ccggcggcgt
481 gaagaagccc caccgttacc ggcccggcac ggtggctctg cgcgagatcc gccgctacca
541 gaagtcgacc gagctgctga ttcgcaaact gccattccag cgtctagtcc gtgagatcgc
601 gcaggacttc aagactgatc tgcgttttca gagctcggcg gtgatggcgc tgcaggaggc
661 ctgcgaggcc tacctggtgg ggctgtttga ggacaccaac ctatgcgcca ttcacgccaa
721 gcgagtgact atcatgccca aggacatcca gcttgctcgc cgcattcgtg gggagagggc
781 gtaaattgtc ttgtgaatgt gtgctaacca aaacccaaag gctcttttca gagccaacca
841 ccttttctat aaaagttgct gtttactgtt aaaaaaaaaa aaaaaaaaaa
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