LOCUS BC031080 2358 bp mRNA linear HTC 08-DEC-2006
DEFINITION Homo sapiens v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1,
mRNA (cDNA clone IMAGE:5296819), with apparent retained intron.
ACCESSION BC031080
VERSION BC031080.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51702529
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2358
/db_xref="H-InvDB:HIT000092291"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5296819"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 767 a 447 c 542 g 602 t
ORIGIN
1 ggaggaggtg gagagtgagg ccgaggcgtg gggagcccgg gaactccctc ctcctgaagt
61 aacgcgtccc gggccggctc tgccgtcgtt gctgccgccg ggcgccccgg gacgaggagg
121 tggaggaggg agagggcccg cgggcctcgc ctccgccctc cgccacctcg agctgcggta
181 gcagcgactc atgagagcgc ggccggagga caggctgtgg aagagagcca ccattatcaa
241 aatgatcaca gttgcaaaca ttcgtgcttc aaataccagc cactatgtta gatttgataa
301 tgggctgcat taaaagtaaa gaaaacaaaa gtccagccat taaatacaga cctgaaaata
361 ctccagagcc tgtcagtaca agtgtgagcc attatggagc agaacccact acagtgtcac
421 catgtccgtc atcttcagca aagggaacag cagttaattt cagcagtctt tccatgacac
481 catttgagga tcctcagggg taacgccttt tggaggtgca tcttcctcat tttcagtggt
541 gccaagttca tatcctgctg gtttaacagg tggtgttact atatttgtgg ccttatatga
601 ttatgaagct agaactacag aagacctttc atttaagaag ggtgaaagat ttcaaataat
661 taacaatacg gaaggagatt tgtgggaagc aagatcaatc gctacaggaa agaatggtta
721 tatcccgagc aattatgtag cgcctgcaga ttccattcag gcagaagaat ggtattttgg
781 caaaatgggg agaaaagatg ctgaaagatt acttttgaat cctggaaatc aacgaggtat
841 tttcttagta agagagagtg aaacaactaa aggtgcttat tccctttcta ttcgtgattg
901 ggatgagata aggggtgaca atgtgaaaca ctacaaaatt aggaaacttg acaatggtgg
961 atactatatc acaaccagag cacaatttga tactctgcag aaattggtga aacactacac
1021 agaacatgct gatggtttat gccacaagtt gacaactgtg tgtccaactg tgaaacctca
1081 gactcaaggt ctagcaaaag atgcttggga aatccctcga gaatctttgc gactagaggt
1141 taaactagga caaggatgtt tcggcgaagt gtggatggga acatggaatg gaaccacgaa
1201 agtagcaatc aaaacactaa aaccaggtac aatgatgcca gaagctttcc ttcaagaagc
1261 tcagataatg aaaaaattaa gacatgataa acttgttcca ctatatgctg ttgtttctga
1321 agaaccaatt tacattgtca ctgaatttat gtcaaaagga agcttattag atttccttaa
1381 ggaaggagat ggaaagtatt tgaagcttcc acagctggtt gatatggctg ctcagattgc
1441 tgatggtatg gcatatattg aaagaatgaa ctatattcac cgagatcttc gggctgctaa
1501 tattcttgta ggagaaaatc ttgtgtgcaa aatagcagac tttggtttag caaggttaat
1561 tgaagacaat gaatacacag caagacaagg tgcaaaattt ccaatcaaat ggacagctcc
1621 tgaagctgca ctgtatggtc ggtttacaat aaagtctgat gtctggtcat ttggaattct
1681 gcaaacagaa ctagtaacaa agggccgagt gccatatcca ggtatggtga accgtgaagt
1741 actagaacaa gtggagcgag gatacaggat gccgtgccct cagggctgtc cagaatccct
1801 ccatgaattg atgaatctgt gttggaagaa ggaccctgat gaaagaccaa catttgaata
1861 tattcagtcc ttcttggaag gctacttcac tgctacagag ccacagtacc agccaggaga
1921 aaatttataa ttcaagtagc ctattttata tgcacaaatc tgccaaaata taaagaactt
1981 gtgtagattt tctacaggaa tcaaaagaag aaaatcttct ttactctgca tgtttttaat
2041 ggtaaactgg aatcccagat atggttgcac aaaaccactt ttttttcccc aagtattaaa
2101 ctctaatgta ccaatgatga atttatcagc gtatttcagg gtccaaacaa aatagagcta
2161 agatactgat gacagtgtgg gtgacagcat ggtaatgaag gacagtgagg ctcctgctta
2221 tttataaatc atttcctttc ttttttcccc caaagtcaga attgctcaaa gaaaattatt
2281 tattgttaca gataaaactt gagagataaa aagctatacc ataataaaat ctaaaattaa
2341 ggaaaaaaaa aaaaaaaa
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