LOCUS BC031069 2020 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens family with sequence similarity 116, member B, mRNA
(cDNA clone MGC:33692 IMAGE:5296726), complete cds.
ACCESSION BC031069
VERSION BC031069.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2020)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2020)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: l Column: 13.
FEATURES Location/Qualifiers
source 1..2020
/db_xref="H-InvDB:HIT000051011"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33692 IMAGE:5296726"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2020
/gene="FAM116B"
/gene_synonym="MGC33692"
/db_xref="GeneID:414918"
/db_xref="HGNC:HGNC:32690"
CDS 73..1830
/gene="FAM116B"
/gene_synonym="MGC33692"
/codon_start=1
/product="family with sequence similarity 116, member B"
/protein_id="AAH31069.1"
/db_xref="GeneID:414918"
/db_xref="HGNC:HGNC:32690"
/translation="MDALLGTGPRRARGCLGAAGPTSSGRAARTPAAPWARFSAWLEC
VCVVTFDLELGQALELVYPNDFRLTDKEKSSICYLSFPDSHSGCLGDTQFSFRMRQCG
GQRSPWHADDRHYNSRAPVALQREPAHYFGYVYFRQVKDSSVKRGYFQKSLVLVSRLP
FVRLFQALLSLIAPEYFDKLAPCLEAVCSEIDQWPAPAPGQTLNLPVMGVVVQVRIPS
RVDKSESSPPKQFDQENLLPAPVVLASVHELDLFRCFRPVLTHMQTLWELMLLGEPLL
VLAPSPDVSSEMVLALTSCLQPLRFCCDFRPYFTIHDSEFKEFTTRTQAPPNVVLGVT
NPFFIKTLQHWPHILRVGEPKMSGDLPKQVKLKKPSRLKTLDTKPGLYTAYTAHLHRD
KALLKRLLKGVQKKRPSDVQSALLRRHLLELTQSFIIPLEHYMASLMPLQKSITPWKT
PPQIQPFSQDDFLRSLEHAGPQLTCILKGDWLGLYRRFFKSPHFDGWYRQRHKEMALK
LEALHLEAICEANIETWMKDKSEVEVVDLVLKLREKLVRAQGHQLPVKEATLQRAQLY
IETVIGSLPKDLQAVLCPP"
BASE COUNT 388 a 681 c 584 g 367 t
ORIGIN
1 gactgttctg aggagcggcc cggacgcgcg ccgcccccgc ccgcgtttcc ccggcaaccc
61 gcggccgccg ccatggacgc gctgttgggc acagggcctc gccgggctcg cggctgcctg
121 ggcgcggctg gacccacgtc ttcaggtcgc gcggcgcgga ccccggcggc gccctgggcg
181 cgcttctccg cctggctgga gtgtgtgtgc gtggtcacct tcgacctgga gctgggccag
241 gcgctggagc tggtgtatcc gaacgacttc cggctcacag acaaggagaa aagcagcatc
301 tgctacctgt cttttcccga ctcgcactca ggctgccttg gagacactca gttcagcttc
361 cgcatgcgcc agtgtggagg gcagaggagc ccctggcatg ccgacgacag gcactacaac
421 agcagggccc ctgtggcact gcagagggag ccggcacact acttcggcta cgtgtacttc
481 aggcaggtga aggacagctc tgtgaagagg ggctacttcc agaagtcttt ggtgctggtg
541 tcccgcttgc cctttgtccg gctgttccaa gcgctgctaa gcctcatcgc ccccgagtac
601 tttgacaagc tggcgccctg cctggaagca gtgtgcagtg agatcgacca gtggccggcg
661 cctgcacctg ggcagaccct gaacctacct gtcatgggcg ttgttgtcca ggtgcgcatc
721 ccatccaggg tggacaagtc cgagtccagt cctccgaagc agtttgacca agagaacctg
781 ctgccagccc cagtggttct tgctagcgtc cacgagctgg acctgttcag gtgcttccgg
841 cctgtgctga ctcatatgca gacactgtgg gagctcatgc tcctcgggga gcccctgcta
901 gtcctggcac cctcgcccga cgtgtcctcg gagatggtgc tggccttgac cagctgcctg
961 cagcccctca ggttctgctg cgacttccgt ccctacttca ccatccatga cagcgagttc
1021 aaggagttca ccacacgcac gcaggcccca ccaaacgtgg tcctgggagt cacaaaccct
1081 ttctttatca aaacactcca gcactggccc cacatcctcc gagtcgggga gcccaagatg
1141 tcaggagacc tgcctaagca agtcaagctg aaaaagcctt caaggttgaa gaccctggac
1201 accaagccag gcctctacac cgcttacacg gcccacctcc accgcgacaa ggcgctgctc
1261 aaacggctgc tcaagggcgt gcagaagaag cggccgtcag atgtgcagag cgccctgctg
1321 cggcggcacc tcctggagct cacccagagc ttcatcatcc ccctggagca ctacatggcc
1381 agcctcatgc ccctgcagaa gagcatcacg ccctggaaga ctccccccca gatccagccc
1441 ttcagccagg atgacttcct gcgtagcctg gagcatgctg ggccccagct cacctgcatc
1501 ctcaagggcg actggctggg tctctacagg cggtttttca agtcccccca ttttgatggc
1561 tggtaccggc agcggcacaa ggagatggcc ctgaagctgg aggccctgca cctggaggct
1621 atctgtgagg cgaacatcga gacctggatg aaagacaagt ccgaggtgga ggtcgtggac
1681 ctggtcctga aacttcgtga gaagctggtg cgggctcagg gccaccagct ccctgtgaag
1741 gaggctacgc tgcagcgggc acagctgtac atcgagacgg tcatcggctc cctgcccaaa
1801 gacctgcagg ctgtcttgtg ccctccctag aacaaagcca agggccacgg tcccagggcc
1861 ctaggtctgc ctgagcctcc cactccccag tggtggcggc actgggccaa gcacacactc
1921 cccttccttg gccccccgcc cagactgcag gctccccttc ctgcaccacc attgtctcag
1981 cagtaaaggc gacatttgga accacaaaaa aaaaaaaaaa
//