LOCUS BC031053 2668 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens lecithin retinol acyltransferase
(phosphatidylcholine--retinol O-acyltransferase), mRNA (cDNA clone
MGC:33103 IMAGE:5272486), complete cds.
ACCESSION BC031053
VERSION BC031053.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2668)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2668)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: d Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46359072.
FEATURES Location/Qualifiers
source 1..2668
/db_xref="H-InvDB:HIT000041222"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33103 IMAGE:5272486"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2668
/gene="LRAT"
/gene_synonym="MGC33103"
/db_xref="GeneID:9227"
/db_xref="MIM:604863"
CDS 63..755
/gene="LRAT"
/gene_synonym="MGC33103"
/codon_start=1
/product="LRAT protein"
/protein_id="AAH31053.1"
/db_xref="GeneID:9227"
/db_xref="MIM:604863"
/translation="MKNPMLEVVSLLLEKLLLISNFTLFSSGAAGEDKGRNSFYETSS
FHRGDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDMGRTQKVVSNKRLILGVI
VKVASIRVDTVEDFAYGANILVNHLDESLQKKALLNEEVARRAEKLLGFTPYSLLWNN
CEHFVTYCRYGTPISPQSDKFCETVKIIIRDQRSVLASAVLGLASIVCTGLVSYTTLP
AIFIPFFLWMAG"
BASE COUNT 848 a 487 c 503 g 830 t
ORIGIN
1 actgaatgta gccacctttc ttaacggtcc gggaaaccag aggtctctcc agctactcag
61 ggatgaagaa ccccatgctg gaggtggtgt ctttactact ggagaagctg ctcctcatct
121 ccaacttcac gctctttagt tcgggcgccg cgggcgaaga caaagggagg aacagttttt
181 atgaaaccag ctctttccac cgaggcgacg tgctggaggt gccccggacc cacctgaccc
241 actatggcat ctacctagga gacaaccgtg ttgcccacat gatgcccgac atcctgttgg
301 ccctgacaga cgacatgggg cgcacgcaga aggtggtctc caacaagcgt ctcatcctgg
361 gcgttattgt caaagtggcc agcatccgcg tggacacagt ggaggacttc gcctacggag
421 ctaacatcct ggtcaatcac ctggacgagt ccctccagaa aaaggcactg ctcaacgagg
481 aggtggcgcg gagggctgaa aagctgctgg gctttacccc ctacagcctg ctgtggaaca
541 actgcgagca cttcgtgacc tactgcagat atggcacccc gatcagtccc cagtccgaca
601 agttttgtga gactgtgaag ataattattc gtgatcagag aagtgttctt gcttcagcag
661 tcttgggatt ggcgtctata gtctgtacgg gcttggtatc atacactacc cttcctgcaa
721 tttttattcc attcttccta tggatggctg gctaacttca tacccccatg tcagtgtgtg
781 tattctgtat gtaaatatgt ttatatttat agagcatcaa tcaatataag cattattgag
841 aaaaatgtga cccgtaacac tgtgttctgg ataaaaatgt gattaggaat cacgcaaagt
901 gcttactgtg taagcccaag aacaaaggct ttctgaatct tctcaggcag ttcagattta
961 aagcaccatc caaaccttgg aaatacgaca gggtgtggta gaattcagca atatgagaaa
1021 accagcccct aaaatgatag ccacaagaga ttaattgtgt ttttttttct cctgtaatcc
1081 ttgtactgtt cggctgaatt tgaagattgg aagacttata ttgagaccag taactttact
1141 gtaaatttac tttgtttcat tgaaaaaaca aattgataaa catattaaac tggaagaatt
1201 ttctttattc aaatgaaaac atgtttgatg actggtcaaa aaataagctc ataatctatt
1261 tttttcatgt agtatataag tcaagaatgt tttattgtca ttatgtgaaa ccaatattgg
1321 caaatagtac tttaatgatg aagtaaatga ccagaaatta tagaaatctg tgttttcctg
1381 taaaaatagc actatagtat cacttgaaca atttgatttg gctttactta ctaggaagcc
1441 tggaattcat tatttttttc cttttatgtg ccactgtggc tactttaaat cactctgaga
1501 ggtaaatgga tataggattg aagttatgtg ggtatttggc atgtgtgtgt gaaataaata
1561 tgtagatagt cacatataca cagactgaga gataaattgt tcttgattgc tttattatca
1621 tcatactagt gtgttcatta tagagtatct gtagaggtga atgtaagtaa gtccaatcta
1681 ttttcttatg tcattgaatt tgtagtgtta acttgcatat atgttattgg atgggttgtc
1741 ttttaaagca tttactaatg tactctgaaa tttttaaaag ccttcagatt tgttttctag
1801 tcactttttt ccatatcatt tctaattata gtttatatcc ttaaaagaag gatgccacag
1861 tagtatgtaa aacccaaaca agtagaaccc aagcaaataa aattatttaa aataatttta
1921 aagtggctta gtactgccag tcatgtaaat tgattctgct gagggtctta taagaattga
1981 gatataacaa tggtaaaaca agcattcaag cacttttaca aaattaccaa attcttaaaa
2041 tgaagccaca gctagacttg catttcaggt attaaaattg ctttcttaac tgtcaagaat
2101 cacaaaataa caaatcatat tatgagtgaa tatggggagg gcggggccaa tcagtcaatg
2161 ataatctgaa caaattttaa gagcagattt tagattaata atgttttatc accactaatt
2221 tgcccacaac aaactcagta tttaattttt caaattaaat attaaattat ttaagtattt
2281 taaataatta aaacattaaa tggcaacacc atagaatata ggtgttctct ggacctattc
2341 taaccactta aaattatctt aagtatgcat acataaaagc aaccactatg agaactaccg
2401 tgttagtggt ttttcactta ctgtatatta cccttgtagg aatagtttaa ggaaattcat
2461 ttcttaaaaa tatagtgtcc tcaaataatt aatttttttg caaactttag ttattacagg
2521 cagcaaaaac cactgtctga aactaaatct gtgttcaaag atgaagaccc ctcattaaaa
2581 gccaaggacg ttcttaagat tggaactgac ataattagtc ttgacttact tcattaaagc
2641 aagattcaat tcaaaaaaaa aaaaaaaa
//