LOCUS BC031027 919 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:32826
IMAGE:4715377), complete cds.
ACCESSION BC031027
VERSION BC031027.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 919)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..919
/db_xref="H-InvDB:HIT000041210"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32826 IMAGE:4715377"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..919
/gene="UBB"
/gene_synonym="MGC8385"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
CDS 99..788
/gene="UBB"
/gene_synonym="MGC8385"
/codon_start=1
/product="ubiquitin B"
/protein_id="AAH31027.1"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
/translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV
KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST
LHLVLRLRGGC"
BASE COUNT 255 a 235 c 242 g 187 t
ORIGIN
1 ggaggggcgg ttggctttgt tgggtgagct tgtttgtgtc cctgtgggtg gacgtggttg
61 gtgattggca ggatcctggt atccgctaac aggtcaaaat gcagatcttc gtgaaaaccc
121 ttaccggcaa gaccatcacc cttgaggtgg agcccagtga caccatcgaa aatgtgaagg
181 ccaagatcca ggataaggaa ggcattcccc ccgaccagca gaggctcatc tttgcaggca
241 agcagctgga agatggccgt actctttctg actacaacat ccagaaggag tcgaccctgc
301 acctggtcct gcgtctgaga ggtggtatgc agatcttcgt gaagaccctg accggcaaga
361 ccatcaccct ggaagtggag cccagtgaca ccatcgaaaa tgtgaaggcc aagatccagg
421 ataaagaagg catccctccc gaccagcaga ggctcatctt tgcaggcaag cagctggaag
481 atggccgcac tctttctgac tacaacatcc agaaggagtc gaccctgcac ctggtcctgc
541 gtctgagagg tggtatgcag atcttcgtga agaccctgac cggcaagacc atcactctgg
601 aggtggagcc cagtgacacc atcgaaaatg tgaaggccaa gatccaagat aaagaaggca
661 tcccccccga ccagcagagg ctcatctttg caggcaagca gctggaagat ggccgcactc
721 tttctgacta caacatccag aaagagtcga ccctgcacct ggtcctgcgc ctgaggggtg
781 gctgttaatt cttcagtcat ggcattcgca gtgcccagtg atggcattac tctgcactat
841 agccatttgc cccaacttaa gtttagaaat tacaagtttc agtaatagct gaaaaaaaaa
901 aaaaaaaaaa aaaaaaaaa
//