LOCUS BC031023 1205 bp mRNA linear HUM 28-SEP-2004
DEFINITION Homo sapiens major histocompatibility complex, class II, DR beta 1,
mRNA (cDNA clone MGC:32809 IMAGE:4695321), complete cds.
ACCESSION BC031023
VERSION BC031023.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1205)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: j Column: 12.
FEATURES Location/Qualifiers
source 1..1205
/db_xref="H-InvDB:HIT000041208_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32809 IMAGE:4695321"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1205
/gene="HLA-DRB1"
/gene_synonym="HLA-DR1B"
/db_xref="GeneID:3123"
/db_xref="MIM:142857"
CDS 64..864
/gene="HLA-DRB1"
/gene_synonym="HLA-DR1B"
/codon_start=1
/product="HLA-DRB1 protein"
/protein_id="AAH31023.1"
/db_xref="GeneID:3123"
/db_xref="MIM:142857"
/translation="MVCLRLPGGSCMAVLTVTLMVLSSPLVLAGDTRPRFLEYSTSEC
HFFNGTERVRFLDRYFYNQEEYVRFDSDVGEFRAVTELGRPDEEYWNSQKDFLEDRRA
AVDTYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRW
FRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWR
ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPRGFLS"
BASE COUNT 277 a 311 c 331 g 286 t
ORIGIN
1 atagttctcc ctgagtgaga cttgcctgct gctctggccc ctggtcctgt cctgttctcc
61 agcatggtgt gtctgaggct ccctggaggc tcctgcatgg cagttctgac agtgacactg
121 atggtgctga gctccccact ggttttggct ggggacacca gaccacgttt cttggagtac
181 tctacgtctg agtgtcattt cttcaatggg acggagcggg tgcggttcct ggacagatac
241 ttctataacc aagaggagta cgtgcgcttc gacagcgacg tgggggagtt ccgggcggtg
301 acggagctgg ggcggcctga tgaggagtac tggaacagcc agaaggactt cctggaagac
361 aggcgggccg cggtggacac ctactgcaga cacaactacg gggttgtgga gagcttcaca
421 gtgcagcggc gagtccatcc taaggtgact gtgtatcctt caaagaccca gcccctgcag
481 caccacaacc tcctggtctg ttctgtgagt ggtttctatc caggcagcat tgaagtcagg
541 tggttccgga atggccagga agagaagact ggggtggtgt ccacaggcct gatccacaat
601 ggagactgga ccttccagac cctggtgatg ctggaaacag ttcctcggag tggagaggtt
661 tacacctgcc aagtggagca cccaagcgtg acaagccctc tcacagtgga atggagagca
721 cggtctgaat ctgcacagag caagatgctg agtggagtcg ggggctttgt gctgggcctg
781 ctcttccttg gggccgggct gttcatctac ttcaggaatc agaaaggaca ctctggactt
841 cagccaagag gattcctgag ctgaagtgca gatgacacat tcaaagaaga actttctgcc
901 ccagctttgc aggatgaaaa gctttccctc ctggctgtta ttcttccaca agagagggct
961 ttctcaggac ctggttgcta ctggttcagc aactgcagaa aatgtcctcc cttgtggctt
1021 cctcagctcc tgttcttggc ctgaagccca cagctttgat ggcagcgcct catcttcaac
1081 ttttgtgctc ccctttgcct aaaccctatg gcctcctgtg catctgtact caccctgtac
1141 cacaaacaca ttacattatt aaatgtttct caaagataaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaa
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