LOCUS BC031021 2042 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens lysosomal protein transmembrane 4 beta, mRNA (cDNA
clone MGC:32802 IMAGE:4690368), complete cds.
ACCESSION BC031021
VERSION BC031021.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..2042
/db_xref="H-InvDB:HIT000041207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32802 IMAGE:4690368"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2042
/gene="LAPTM4B"
/gene_synonym="LAPTM4beta"
/gene_synonym="LC27"
/db_xref="GeneID:55353"
/db_xref="HGNC:HGNC:13646"
CDS 211..891
/gene="LAPTM4B"
/gene_synonym="LAPTM4beta"
/gene_synonym="LC27"
/codon_start=1
/product="LAPTM4B protein"
/protein_id="AAH31021.1"
/db_xref="GeneID:55353"
/db_xref="HGNC:HGNC:13646"
/translation="MKMVAPWTRFYSNSCCLCCHVRTGTILLGVWYLIINAVVLLILL
SALADPDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWII
PFFCYQIFDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILL
FISIILTFKGYLISCVWNCYRYINGRNSSDVLVYVTSNDTTVLLPPYDDATVNGAAKE
PPPPYVSA"
BASE COUNT 496 a 464 c 475 g 607 t
ORIGIN
1 gcagccgtcg ccttcggagc gaagggtacc gacccggcag aagctcggag ctctcggggt
61 atcgaggagg caggcccgcg ggcgcacggg cgagcgggcc gggagccgga gcggcggagg
121 agccggcagc agcggcgcgg cgggctccag gcgaggcggt cgacgctcct gaaaacttgc
181 gcgcgcgctc gcgccactgc gcccggagcg atgaagatgg tcgcgccctg gacgcggttc
241 tactccaaca gctgctgctt gtgctgccat gtccgcaccg gcaccatcct gctcggcgtc
301 tggtatctga tcatcaatgc tgtggtactg ttgattttat tgagtgccct ggctgatccg
361 gatcagtata acttttcaag ttctgaactg ggaggtgact ttgagttcat ggatgatgcc
421 aacatgtgca ttgccattgc gatttctctt ctcatgatcc tgatatgtgc tatggctact
481 tacggagcgt acaagcaacg cgcagcctgg atcatcccat tcttctgtta ccagatcttt
541 gactttgccc tgaacatgtt ggttgcaatc actgtgctta tttatccaaa ctccattcag
601 gaatacatac ggcaactgcc tcctaatttt ccctacagag atgatgtcat gtcagtgaat
661 cctacctgtt tggtccttat tattcttctg tttattagca ttatcttgac ttttaagggt
721 tacttgatta gctgtgtttg gaactgctac cgatacatca atggtaggaa ctcctctgat
781 gtcctggttt atgttaccag caatgacact acggtgctgc tacccccgta tgatgatgcc
841 actgtgaatg gtgctgccaa ggagccaccg ccaccttacg tgtctgccta agccttcaag
901 tgggcggagc tgagggcagc agcttgactt tgcagacatc tgagcaatag ttctgttatt
961 tcacttttgc catgagcctc tctgagcttg tttgttgctg aaatgctact ttttaaaatt
1021 tagatgttag attgaaaact gtagttttca acatatgctt tgctggaaca ctgtgataga
1081 ttaactgtag aattcttcct gtacgattgg ggatataatg ggcttcacta accttcccta
1141 ggcattgaaa cttcccccaa atctgatgga cctagaagtc tgcttttgta cctgctgggc
1201 cccaaagttg ggcatttttc tctctgttcc ctctcttttg aaaatgtaaa ataaaaccaa
1261 aaatagacaa ctttttcttc agccattcca gcatagagaa caaaacctta tggaaacagg
1321 aatgtcaatt gtgtaatcat tgttctaatt aggtaaatag aagtccttat gtatgtgtta
1381 caagaatttc ccccacaaca tcctttatga ctgaagttca atgacagttt gtgtttggtg
1441 gtaaaggatt ttctccatgg cctgaattaa gaccattaga aagcaccagg ccgtgggagc
1501 agtgaccatc tgctgactgt tcttgtggat cttgtgtcca gggacatggg gtgacatgcc
1561 tcgtatgtgt tagagggtgg aatggatgtg tttggcgctg catgggatct ggtgcccctc
1621 ttctcctgga ttcacatccc cacccagggc ccgcttttac taagtgttct gccctagatt
1681 ggttcaagga ggtcatccaa ctgactttat caagtggaat tgggatatat ttgatatact
1741 tctgcctaac aacatggaaa agggttttct tttccctgca agctacatcc tactgctttg
1801 aacttccaag tatgtctagt caccttttaa aatgtaaaca ttttcagaaa aatgaggatt
1861 gccttccttg tatgcgcttt ttaccttgac tacctgaatt gcaagggatt tttatatatt
1921 catatgttac aaagtcagca actctcctgt tggttcatta ttgaatgtgc tgtaaattaa
1981 gttgtttgca attaaaacaa ggtttgccca ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aa
//