LOCUS BC030977 2347 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier family 4, sodium bicarbonate
cotransporter, member 4, mRNA (cDNA clone MGC:32627 IMAGE:4610968),
complete cds.
ACCESSION BC030977
VERSION BC030977.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2347)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2347)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507024.
FEATURES Location/Qualifiers
source 1..2347
/db_xref="H-InvDB:HIT000041184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32627 IMAGE:4610968"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2347
/gene="SLC4A4"
/gene_synonym="hhNMC"
/gene_synonym="HNBC1"
/gene_synonym="KNBC"
/gene_synonym="NBC1"
/gene_synonym="NBC2"
/gene_synonym="pNBC"
/db_xref="GeneID:8671"
/db_xref="MIM:603345"
CDS 197..2137
/gene="SLC4A4"
/gene_synonym="hhNMC"
/gene_synonym="HNBC1"
/gene_synonym="KNBC"
/gene_synonym="NBC1"
/gene_synonym="NBC2"
/gene_synonym="pNBC"
/codon_start=1
/product="SLC4A4 protein"
/protein_id="AAH30977.1"
/db_xref="GeneID:8671"
/db_xref="MIM:603345"
/translation="MSTENVEGKPSNLGERGRARSSTFLRVVQPMFNHSIFTSAVSPA
AERIRFILGEEDDSPAPPQLFTELDELLAVDGQEMEWKETARWIKFEEKVEQGGERWS
KPHVATLSLHSLFELRTCMEKGSIMLDREASSLPQLVEMIVDHQIETGLLKPELKDKV
TYTLLRKHRHQTKKSNLRSLADIGKTVSSASRMFTNPDNGSPAMTHRNLTSSSLNDIS
DKPEKDQLKNKFMKKLPRDAEASNVLVGEVDFLDTPFIAFVRLQQAVMLGALTEVPVP
TRFLFILLGPKGKAKSYHEIGRAIATLMSDEVFHDIAYKAKDRHDLIAGIDEFLDEVI
VLPPGEWDPAIRIEPPKSLPSSDKRKNMYSGGENVQMNGDTPHDGGHGGGGHGDCEEL
QRTGRFCGGLIKDIKRKAPFFASDFYDALNIQALSAILFIYLATVTNAITFGGLLGDA
TDNMQGVLESFLGTAVSGAIFCLFAGQPLTILSSTGPVLVFERLLFNFSKDNNFDYLE
FRLWIGLWSAFLCLILVATDASFLVQYFTRFTEEGFSSLISFIFIYDAFKKMIKLADY
YPINSNFKVGYNTLFSCTCVPPDPGEGITLCVYARFVFGGRCRLHACKFSTCCHGPQE
LVLFFSLKNSATEFDVSLPEVF"
BASE COUNT 628 a 484 c 584 g 651 t
ORIGIN
1 aggaggggaa gtgagtggtt agacctcagc tcatctgagg gctaaaggtt ctttgtgaca
61 catcacacag aattggagtg ctgtccttct ggagagtggt ggagaaccaa gatacagttc
121 agaaccaaag gaatagagaa gggctttgat ttctttttgg ctttagattg gggatttggg
181 aggcttagca ggaaagatgt ccactgaaaa tgtggaaggg aagcccagta accttgggga
241 gagaggaaga gcccggagct ccactttcct cagggttgtc cagccaatgt ttaaccacag
301 tattttcact tctgcagtct ctcctgctgc agaacgcatc cgattcatct tgggagagga
361 ggatgacagc ccagctcccc ctcagctctt cacggaactg gatgagctgc tggccgtgga
421 tgggcaggag atggagtgga aggaaacagc caggtggatc aagtttgaag aaaaagtgga
481 acagggtggg gaaagatgga gcaagcccca tgtggccaca ttgtcccttc atagtttatt
541 tgagctgagg acatgtatgg agaaaggatc catcatgctt gatcgggagg cttcttctct
601 cccacagttg gtggagatga ttgttgacca tcagattgag acaggcctat tgaaacctga
661 acttaaggat aaggtgacct atactttgct ccggaagcac cggcatcaaa ccaagaaatc
721 caaccttcgg tccctggctg acattgggaa gacagtctcc agtgcaagta ggatgtttac
781 caaccctgat aatggtagcc cagccatgac ccataggaat ctgacttcct ccagtctgaa
841 tgacatttct gataaaccgg agaaggacca gctgaagaat aagttcatga aaaaattgcc
901 acgtgatgca gaagcttcca acgtgcttgt tggggaggtt gactttttgg atactccttt
961 cattgccttt gttaggctac agcaggctgt catgctgggt gccctgactg aagttcctgt
1021 gcccacaagg ttcttgttca ttctcttagg tcctaagggg aaagccaagt cctaccacga
1081 gattggcaga gccattgcca ccctgatgtc tgatgaggtg ttccatgaca ttgcttataa
1141 agcaaaagac aggcacgacc tgattgctgg tattgatgag ttcctagatg aagtcatcgt
1201 ccttccacct ggggaatggg atccagcaat taggatagag cctcctaaga gtcttccatc
1261 ctctgacaaa agaaagaata tgtactcagg tggagagaat gttcagatga atggggatac
1321 gccccatgat ggaggtcacg gaggaggagg acatggggat tgtgaagaat tgcagcgaac
1381 tggacggttc tgtggtggac taattaaaga cataaagagg aaagcgccat tttttgccag
1441 tgatttttat gatgctttaa atattcaagc tctttcggca attctcttca tttatctggc
1501 aactgtaact aatgctatca cttttggagg actgcttggg gatgccactg acaacatgca
1561 gggcgtgttg gagagtttcc tgggcactgc tgtctctgga gccatctttt gcctttttgc
1621 tggtcaacca ctcactattc tgagcagcac cggacctgtc ctagtttttg agaggcttct
1681 atttaatttc agcaaggaca ataattttga ctatttggag tttcgccttt ggattggcct
1741 gtggtccgcc ttcctatgtc tcattttggt agccactgat gccagcttct tggttcaata
1801 cttcacacgt ttcacggagg agggcttttc ctctctgatt agcttcatct ttatctatga
1861 tgctttcaag aagatgatca agcttgcaga ttactacccc atcaactcca acttcaaagt
1921 gggctacaac actctctttt cctgtacctg tgtgccacct gacccaggtg agggcattac
1981 gctttgtgtt tatgctcgct ttgtatttgg aggaaggtgt aggctccatg cttgcaaatt
2041 ttcaacatgc tgtcatggtc ctcaggaatt agtcttgttt ttttctctga aaaactctgc
2101 tactgaattt gatgtctcat tgcctgaggt attttagctg tatgattcaa ccaggaagga
2161 gaccaggagc tctggaatgt gaacataacc aactcaatat tttgaaatta actcaaactg
2221 tgggatttgc aaggaattca tgtgtacatt attcttgatt ttataagtgg ggaaacctgg
2281 atacatgtat taacagatat aaatatgtga caaacccaaa aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaa
//