LOCUS BC030792 3876 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens cyclin-dependent kinase 5, regulatory subunit 1 (p35),
mRNA (cDNA clone MGC:33831 IMAGE:5263087), complete cds.
ACCESSION BC030792
VERSION BC030792.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3876)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3876)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304373.
FEATURES Location/Qualifiers
source 1..3876
/db_xref="H-InvDB:HIT000041136"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33831 IMAGE:5263087"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3876
/gene="CDK5R1"
/gene_synonym="CDK5P35"
/gene_synonym="CDK5R"
/gene_synonym="MGC33831"
/gene_synonym="NCK5A"
/gene_synonym="p23"
/gene_synonym="p25"
/gene_synonym="p35"
/gene_synonym="p35nck5a"
/db_xref="GeneID:8851"
/db_xref="HGNC:HGNC:1775"
/db_xref="MIM:603460"
CDS 228..1151
/gene="CDK5R1"
/gene_synonym="CDK5P35"
/gene_synonym="CDK5R"
/gene_synonym="MGC33831"
/gene_synonym="NCK5A"
/gene_synonym="p23"
/gene_synonym="p25"
/gene_synonym="p35"
/gene_synonym="p35nck5a"
/codon_start=1
/product="cyclin-dependent kinase 5, regulatory subunit 1
(p35)"
/protein_id="AAH30792.1"
/db_xref="GeneID:8851"
/db_xref="HGNC:HGNC:1775"
/db_xref="MIM:603460"
/translation="MGTVLSLSPSYRKATLFEDGAATVGHYTAVQNSKNAKDKNLKRH
SIISVLPWKRIVAVSAKKKNSKKVQPNSSYQNNITHLNNENLKKSLSCANLSTFAQPP
PAQPPAPPASQLSGSQTGGSSSVKKAPHPAVTSAGTPKRVIVQASTSELLRCLGEFLC
RRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDKGFITPANVVFLYMLCRDVISSEVGS
DHELQAVLLTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQIN
ADPHYFTQVFSDLKNESGQEDKKRLLLGLDR"
BASE COUNT 864 a 1025 c 1032 g 955 t
ORIGIN
1 agcggagagc gccgggaccg cggcggcggg gccgcggcgc gcattgcgga gggcgcggag
61 cgcaggagct gccgcctgcc gggcagatcc aagggggcag cacgcttccc gggagcgccc
121 ccgcctcctc tccggggccg ccgcaggctc ggtgagcggt tttatccctc cggccggcag
181 gctgggcgcg caggggcgcg agcccccgcc cggcgcgcag cagcaccatg ggcacggtgc
241 tgtccctgtc tcccagctac cggaaggcca cgctgtttga ggatggcgcg gccaccgtgg
301 gccactatac ggccgtacag aacagcaaga acgccaagga caagaacctg aagcgccact
361 ccatcatctc cgtgctgcct tggaagagaa tcgtggccgt gtcggccaag aagaagaact
421 caaagaaggt gcagcccaac agcagctacc agaacaacat cacgcacctc aacaatgaga
481 acctgaagaa gtcgctgtcg tgcgccaacc tgtccacatt cgcccagccc ccaccggccc
541 agccgcctgc acccccggcc agccagctct cgggttccca gaccgggggc tcctcctcag
601 tcaagaaagc ccctcaccct gccgtcacct ccgcagggac gcccaaacgg gtcatcgtcc
661 aggcgtccac cagtgagctg cttcgctgcc tgggtgagtt tctctgccgc cggtgctacc
721 gcctgaagca cctgtccccc acggaccccg tgctctggct gcgcagcgtg gaccgctcgc
781 tgcttctgca gggctggcag gacaagggct tcatcacgcc ggccaacgtg gtcttcctct
841 acatgctctg cagggatgtt atctcctccg aggtgggctc ggatcacgag ctccaggccg
901 tcctgctgac atgcctgtac ctctcctact cctacatggg caacgagatc tcctacccgc
961 tcaagccctt cctggtggag agctgcaagg aggccttttg ggaccgttgc ctctctgtca
1021 tcaacctcat gagctcaaag atgctgcaga taaatgccga cccacactac ttcacacagg
1081 tcttctccga cctgaagaac gagagcggcc aggaggacaa gaagcggctc ctcctaggcc
1141 tggatcggtg agcactgtag cctgcgtcat ggctcaagga ttcaatgcat ttttaagaat
1201 ttattattaa atcagttttg tgtacagtat gtgtctagca aagccaccaa gggcctcacc
1261 tttcccacaa tctctccctg gggttttttt catccctgcc aagaactctg ggcacttttg
1321 aactcacgag ccttgcgcaa aacccagaag atgtattcag agccacccag gccactgacc
1381 tcccactttg gggaactcaa aggactgacc tgcccctgcc gcctgtgccc ttgctgggtc
1441 cagggtaggc aaggctgccg gctgcaccct gtatggagct agagaggggc ctctggctgc
1501 ctggcccagg gaggaattgg ggtttctggt tggaggccct tttctggctc ctgtgtggag
1561 ttattcactc tcccagaggc tcctggagcc agccacccta actgagctgc cagtggggtc
1621 gtgaggcaag atccccgcca ccaggggaca tcttcaatct aggcgaggcg aagctgagcg
1681 ggtctagtgg aaagattgtg tctggtcgtt tgaccacaca ccgccctgat ttgctgtttt
1741 ctttttttag ggagaagggc ttttctttag tggagaaatg gaactcgccc ccctaccccc
1801 ttgtctgctg ctcccagcca cgttggtggt attggccgat gagctggttt gactcattaa
1861 tttctctcaa tttgggtccc agctaaagag gtggggtgaa gctggggaca gctttcctgg
1921 gtgagttttt cttttgaata atgtagtgca gtcaccctgt ggcaaatgcc aggacagctg
1981 caggtgccca ttagcaacgc ctgccttctg ggcaaggtga gggatgccat accttgagac
2041 caagccggtg cccacctaag ggctaaggcc tcttgctggt gcacatgaca tttgtcctgc
2101 agagctgggg ggaaggcgat gtggtgaccc cacccccacc cgttaattta aagctgtttc
2161 taaacagttg agtttcttct aaagaggaag ccttgcccag caaggaccag tgagacagcc
2221 ggatcttgga gacaattaca agacggggag tgagactcct gattgctctg gaagcctgct
2281 gatttctaca actgatcatt tgcagctgct ggttttggtt tccaccttac cctactggct
2341 gtaaaaacac aaatgtgtac tttattgatt ttctttctaa ttctcccgca ttggtggctt
2401 gggacttggg agagggagca agccttcctc catggcccat cactcggctg tggagaacaa
2461 agaccaatgt gaagacacta cagaggattc tgtcttccag gcccagtcca ctggggagtg
2521 ctggaatagg gacctggggt ggggaggcag agggtcactt tacataggat taagttcgag
2581 gtggctaccg atttcagcac atgcactact gaaatttaca caaaaagaaa gctgtgaaat
2641 tgaagtccca atttaagagt cctgaggcag aacctggtgg ctggaggcat tcccagaggt
2701 ggggaagaga gcctgcccgg ccggagaaca tctgccttgc tgcacctgag gcccagcaga
2761 gccgttcctg ggactgtcag ataatcggtg cagcggtgga aggagcctgc ggctgctggc
2821 acagacttca cacagcacct cctctctgct gggtttccac acagcctgtc ttcagatcat
2881 gctgccgcgt gcgaccagag gtgggaggcc cctggtggca tggaagaggg agggtcagtg
2941 ccaagtctca ggaggagggc gcatgtgtgt atcaccctca gctggcggaa cctggctgcg
3001 aactgtgcag ttacgttgca tccacaggat tccagttgtg tgtctgtttc cttctctttc
3061 tccgtattta tttttttatt cttcggagga ggtggacatt tcggaagtgg tggggactaa
3121 gggaagaact ctctagttcc ctcagtgtga agcctgtcgt gttctctccc cttgcactgg
3181 tcatcagtat tgtgtaaagg aacaactgat atacttgagt gtgcaagcaa agaacccatt
3241 tgccatgctg ctatgaagac tacttttaga tcaacaataa aaaaaaacct acaaaaaaac
3301 ctttattctt taattgttgc ttttacggtg atattgtgca tgcaaaccag gagcattttg
3361 tgtcttaaga aaaataatct tagaacagat ggctgtgaaa attacaccca tgcacagaac
3421 aagccacagg aataatagtt caggatttgg tttttctctt tttcttgtaa acctggaggg
3481 ttgatatatt ctttccatgc agttattaga acttagtttt gttccaacag ttaaacttgc
3541 aatgaaaaga aaatgtgcca tttttttcac tcagaattat tcatagctgt atatttgaaa
3601 ctgctaatta cacacgtgtg atgtatgttg gttttttagt gcaatttctt ctgtagctat
3661 tctttgacca aactgtgggt attgttaata ttaatttata tttgtctcat tttgtatgta
3721 tgtgtagtgt gtttgtgagt gtgtgtggtt tataatctga caaagtcatg aagctcagtt
3781 tggctgtaat ttaattcccc ttcccttatt tttatttatt tttgtactgt gctgattcaa
3841 taaaatgcac tgaccatcca aaaaaaaaaa aaaaaa
//