LOCUS BC030783 3490 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens glycerol-3-phosphate acyltransferase, mitochondrial,
mRNA (cDNA clone MGC:26846 IMAGE:4821342), complete cds.
ACCESSION BC030783
VERSION BC030783.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3490)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3490)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254942.
FEATURES Location/Qualifiers
source 1..3490
/db_xref="H-InvDB:HIT000041131"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26846 IMAGE:4821342"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3490
/gene="GPAM"
/gene_synonym="KIAA1560"
/gene_synonym="MGC26846"
/gene_synonym="RP11-426E5.2"
/db_xref="GeneID:57678"
/db_xref="HGNC:HGNC:24865"
/db_xref="MIM:602395"
CDS 179..2665
/gene="GPAM"
/gene_synonym="KIAA1560"
/gene_synonym="MGC26846"
/gene_synonym="RP11-426E5.2"
/codon_start=1
/product="glycerol-3-phosphate acyltransferase,
mitochondrial"
/protein_id="AAH30783.1"
/db_xref="GeneID:57678"
/db_xref="HGNC:HGNC:24865"
/db_xref="MIM:602395"
/translation="MDEYALTLGTIDVSYLPHSSEYSVGRCKHTSEEWGECGFRPTIF
RSATLKWKESLMSRKRPFVGRCCYSCTPQSWDKFFNTSIPSLGLRNVIYINETHTRHR
GWLARRLSYVLFIQERDVHKGMFATNVTENVLNSSRVQEAIAEVAAELNPDGSAQQQS
KAVNKVKKKAKRILQEMVATVSPAMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAAT
ETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFI
RRRLDETPDGRKDVLYRALLHGHIVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSV
VVDTLSTNVIPDILIIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKN
YGCVRVDFAQPFSLKEYLESQSQKPVSALLSLEQALLPAILPSRPSDAADEGRDTSIN
ESRNATDESLRRRLIANLAEHILFTASKSCAIMSTHIVACLLLYRHRQGIDLSTLVED
FFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRNDEFFITPSTTVPSV
FELNFYSNGVLHVFIMEAIIACSLYAVLNKRGLGGPTSTPPNLISQEQLVRKAASLCY
LLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDISPSLAEQQWDKKLPE
PLSWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVH
NFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKQK
RVSVLELSSTFLPQCNRQKLLEYILSFVVL"
BASE COUNT 1002 a 734 c 790 g 964 t
ORIGIN
1 agcgggctgg aagtgcgggc ttctgcagca gccgaagctg gagctgctag ggcagcagcg
61 gctcccctgt tgtatggaca ttctgcaccc gaaactgata gctgagtcct gaagttttat
121 gttatgaaac agaagaactt tcatcccagc acatgatttg ggaattacac tttgtgacat
181 ggatgaatat gcactgaccc ttggtacaat agatgtttct tatctgccac attcatcaga
241 atacagtgtt ggtcgatgta agcacacaag tgaggaatgg ggtgagtgtg gctttagacc
301 caccatcttc agatctgcaa ctttaaaatg gaaagaaagc ctaatgagtc ggaaaaggcc
361 atttgttgga agatgttgtt actcctgcac tccccagagc tgggacaaat ttttcaacac
421 cagtatcccg tctttgggtt tgcggaatgt tatttatatc aatgaaactc acacaagaca
481 ccgcggatgg cttgcaagac gcctttctta cgttcttttt attcaagagc gagatgtgca
541 taagggcatg tttgccacca atgtgactga aaatgtgctg aacagcagta gagtacaaga
601 ggcaattgca gaagtggctg ctgaattaaa ccctgatggt tctgcccagc agcaatcaaa
661 agccgttaac aaagtgaaaa agaaagctaa aaggattctt caagaaatgg ttgccactgt
721 ctcaccggca atgatcagac tgactgggtg ggtgctgcta aaactgttca acagcttctt
781 ttggaacatt caaattcaca aaggtcaact tgagatggtt aaagctgcaa ctgagacgaa
841 tttgccgctt ctgtttctac cagttcatag atcccatatt gactatctgc tgctcacttt
901 cattctcttc tgccataaca tcaaagcacc atacattgct tcaggcaata atctcaacat
961 cccaatcttc agtaccttga tccataagct tgggggcttc ttcatacgac gaaggctcga
1021 tgaaacacca gatggacgga aagatgttct ctatagagct ttgctccatg ggcatatagt
1081 tgaattactt cgacagcagc aattcttgga gatcttcctg gaaggcacac gttctaggag
1141 tggaaaaacc tcttgtgctc gggcaggact tttgtcagtt gtggtagata ctctgtctac
1201 caatgtcatc ccagacatct tgataatacc tgttggaatc tcctatgatc gcattatcga
1261 aggtcactac aatggtgaac aactgggcaa acctaagaag aatgagagcc tgtggagtgt
1321 agcaagaggt gttattagaa tgttacgaaa aaactatggt tgtgtccgag tggattttgc
1381 acagccattt tccttaaagg aatatttaga aagccaaagt cagaaaccgg tgtctgctct
1441 actttccctg gagcaagcgt tgttaccagc tatacttcct tcaagaccca gtgatgctgc
1501 tgatgaaggt agagacacgt ccattaatga gtccagaaat gcaacagatg aatccctacg
1561 aaggaggttg attgcaaatc tggctgagca tattctattc actgctagca agtcctgtgc
1621 cattatgtcc acacacattg tggcttgcct gctcctctac agacacaggc agggaattga
1681 tctctccaca ttggtcgaag acttctttgt gatgaaagag gaagtcctgg ctcgtgattt
1741 tgacctgggg ttctcaggaa attcagaaga tgtagtaatg catgccatac agctgctggg
1801 aaattgtgtc acaatcaccc acactagcag gaacgatgag ttttttatca cccccagcac
1861 aactgtccca tcagtcttcg aactcaactt ctacagcaat ggggtacttc atgtctttat
1921 catggaggcc atcatagctt gcagccttta tgcagttctg aacaagaggg gactgggggg
1981 tcccactagc accccaccta acctgatcag ccaggagcag ctggtgcgga aggcggccag
2041 cctgtgctac cttctctcca atgaaggcac catctcactg ccttgccaga cattttacca
2101 agtctgccat gaaacagtag gaaagtttat ccagtatggc attcttacag tggcagagca
2161 cgatgaccag gaagatatca gtcctagtct tgctgagcag cagtgggaca agaagcttcc
2221 agaacctttg tcttggagaa gtgatgaaga agatgaagac agtgactttg gggaggaaca
2281 gcgagattgc tacctgaagg tgagccaatc caaggagcac cagcagttta tcaccttctt
2341 acagagactc cttgggcctt tgctggaggc ctacagctct gctgccatct ttgttcacaa
2401 cttcagtggt cctgttccag aacctgagta tctgcaaaag ttgcacaaat acctaataac
2461 cagaacagaa agaaatgttg cagtatatgc tgagagtgcc acatattgtc ttgtgaagaa
2521 tgctgtgaaa atgtttaagg atattggggt tttcaaggag accaaacaaa agagagtgtc
2581 tgttttagaa ctgagcagca cttttctacc tcaatgcaac cgacaaaaac ttctagaata
2641 tattctgagt tttgtggtgc tgtaggtaac gtgtggcact gctggcaaat gaaggtcatg
2701 agatgagttc cttgtaggta caagcttctg gctcaagagt tgaaggtgcc atcgcagggt
2761 caggcctgcc ctgtcccgaa gtgatctcct ggaagacaag tgccttctcc atccatggat
2821 ctgtgatctt cccagctctg catcaacaca gcagcctgca gataacactt ggggggacct
2881 cagcctctat tcgcaactca taatccgtag actacaagat gaaatctcaa taaattattt
2941 ttgagtttat taaagattga cattttaagt acaactttta aggactaatt actgtgatgg
3001 acacagaaat gtagctgtgt tctggaactg aatcttacat ggtatactta gtgctgctgg
3061 gtaatttgtt ggtatattat ctggttagtg gttaatgctt cctttaaaaa taattgagtc
3121 atccattcac tctttttcag ttttatctgt caatagtagc tacattttta atgggagcac
3181 cttttatccc aaagtgcttt ataaattgag tggactgata tatatcacac ccaggtatca
3241 ctgtgctgtc ctttgctgtc agatttagaa atgtttttaa gagctatgtg aaaacagaca
3301 atattagttt aggtcgggaa ctgagatatt gtaatcaaat agttaacatc aggaagttaa
3361 tttggctggc aaaattctag ggaaacttgg ccagaaaact ggtgttgaag gcttttgctc
3421 atataaacaa gtgccattga gtttcaaatg accagcaaat atatttagaa ctcaaaaaaa
3481 aaaaaaaaaa
//