LOCUS BC030707 1858 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens peptidylprolyl isomerase D, mRNA (cDNA clone MGC:33096
IMAGE:4819748), complete cds.
ACCESSION BC030707
VERSION BC030707.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030707.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: g Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439320.
FEATURES Location/Qualifiers
source 1..1858
/db_xref="H-InvDB:HIT000041115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33096 IMAGE:4819748"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1858
/gene="PPID"
/gene_synonym="CYP-40"
/gene_synonym="CYPD"
/db_xref="GeneID:5481"
/db_xref="HGNC:HGNC:9257"
/db_xref="MIM:601753"
CDS 109..1221
/gene="PPID"
/gene_synonym="CYP-40"
/gene_synonym="CYPD"
/codon_start=1
/product="peptidylprolyl isomerase D"
/protein_id="AAH30707.1"
/db_xref="GeneID:5481"
/db_xref="HGNC:HGNC:9257"
/db_xref="MIM:601753"
/translation="MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKT
AENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEK
FEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVAR
ILENVEVKGEKPAKLCVIAECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDK
ILLITEDLKNIGNTFFKSQNWEMAIKKYAEVLRYVDSSKAVIETADRAKLQPIALSCV
LNIGACKLKMSNWQGAIDSCLEALELDPSNTKALYRRAQGWQGLKEYDQALADLKKAQ
GIAPEDKAIQAELLKVKQKIKAQKDKEKAVYAKMFA"
BASE COUNT 586 a 338 c 438 g 496 t
ORIGIN
1 ggtcagcgtc gctgccggtc tccggcggag acggactctg gagtttgggc ggcccgggcg
61 gccactaggt actctgatat tccgtactaa acacgtctgc aagtcaagat gtcgcacccg
121 tccccccaag ccaagccctc caaccccagt aaccctcgag tcttctttga cgtggacatc
181 ggaggggagc gagttggtcg aattgtctta gaattgtttg cagatatcgt acccaaaact
241 gcggaaaatt ttcgtgcact gtgtacagga gaaaaaggca ttggacacac gactgggaaa
301 cctctccatt tcaaaggatg cccttttcat cgaattatta agaaatttat gattcagggt
361 ggagacttct caaatcagaa tgggacaggt ggagaaagta tttatggtga aaaatttgaa
421 gatgaaaatt tccattacaa gcatgatcgg gagggtttac tgagcatggc aaatgcaggc
481 cgcaacacaa acggttctca gttttttatc acaacagttc caactcctca tttggatggg
541 aaacatgtgg tgtttggcca agtaattaaa ggaataggag tggcaaggat attggaaaat
601 gtggaagtga aaggtgaaaa acctgctaaa ttgtgcgtta ttgcagaatg tggagaattg
661 aaggaaggag atgacggggg aatattccca aaagatggct ctggcgacag tcatccagat
721 ttccctgagg atgcggatat agatttaaaa gatgtagata aaattttatt aataacagaa
781 gacttaaaaa acattggaaa tacttttttc aaatcccaga actgggagat ggctattaaa
841 aaatatgcag aagttttaag atacgtggac agttcaaagg ctgttattga gacagcagat
901 agagccaagc tgcaacctat agctttaagc tgtgtactga atattggtgc ttgtaaactg
961 aagatgtcaa attggcaggg agcaattgac agttgtttag aggctcttga actagaccca
1021 tcaaatacca aagcattgta ccgcagagct caaggatggc aaggattaaa agaatatgat
1081 caagcattgg ctgatcttaa gaaagctcag gggatagcac cagaagataa agctatccag
1141 gcagaattgc tgaaagtcaa acaaaagata aaggcacaga aagataaaga gaaggcagta
1201 tatgcaaaaa tgtttgctta gaaaggattc agttttgctt attgtgtgtt gattgtataa
1261 atgcaataag aaaatgtaaa ggtttttgtc tatgaatatg atccctaatg tgtttctttt
1321 gacaccttag ttccttactg tttacagttt aggagtactg ataggggttc atgcttaata
1381 aacatgtcac aatacagtaa gtaaagtggt tttgtttgtt tctttgagat ggagtcttgc
1441 tctgtcaccc aggctggagt gcggtggcgc aatctcggct cactgcatcc tctgcctccc
1501 gggctcaagc aattctcctg cctcagcttc ccaagtagct gggattacag gcacgtgcca
1561 ccacgcccag ctaatttttg tatttttagt agagatgggg tttcaccata ttggtcacgt
1621 cacgttggtc ttgaactcct gaccttgtga tccaccccgc cttggcctcc caaagtgctg
1681 ggattacagg tgtgagccac cgtgcccggc caagtaaaat gttttttaaa atggttatgt
1741 gcattattca taaaaaataa tggtgtccag tctttttaaa cttgtaaaga cacatcttat
1801 tgaataaaga gatgagagct taaaaaaaaa aaaaaaaaaa ataaaaaaaa aaaaaaaa
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