LOCUS BC030703 3563 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DDHD domain containing 1, mRNA (cDNA clone MGC:26960
IMAGE:4823200), complete cds.
ACCESSION BC030703
VERSION BC030703.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3563)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3563)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC030703.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45120112.
FEATURES Location/Qualifiers
source 1..3563
/db_xref="H-InvDB:HIT000041112"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26960 IMAGE:4823200"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3563
/gene="DDHD1"
/db_xref="GeneID:80821"
/db_xref="HGNC:HGNC:19714"
CDS 185..2803
/gene="DDHD1"
/codon_start=1
/product="DDHD domain containing 1"
/protein_id="AAH30703.1"
/db_xref="GeneID:80821"
/db_xref="HGNC:HGNC:19714"
/translation="MNYPGRGSPRSPEHNGRGGGGGAWELGSDARPAFGGGVCCFEHL
PGGDPDDGDVPLALLRGEPGLHLAPGTDDHNHHLALDPCLSDENYDFSSAESGSSLRY
YSEGESGGGGSSLSLHPPQQPPLVPTNSGGGGATGGSPGERKRTRLGGPAARHRYEVV
TELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGARPQGGDRDGDHVCSP
TGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYPV
YWNQADKIPVMRGQWFIDGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKSID
GKDAVHSFKLSRNHVDWHSVDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGY
VEEATLEDKPSQTTHIVFVVHGIGQKMDQGRIIKNTAMMREAARKIEERHFSNHATHV
EFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQ
ELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRLYEQLLQKEEEL
PDERWMSYEERHLLDELYITKRRLKEIEERLHGLKASSMTQTPALKFKVENFFCMGSP
LAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLEPLILKRYSNISPV
QIHWYNTSNPLPYEHMKPSFLNPAKEPTSVSENEGISTIPSPVTSPVLSRRHYGESIT
NIGKASILGAASIGKGLGGMLFSRFGRSSTTQSSETSKDSMEDEKKPVASPSATTVGT
QTLPHSSSGFLDSALELDHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFM
YKHEHDDDAKPNLDPI"
BASE COUNT 1001 a 790 c 882 g 890 t
ORIGIN
1 aacgcagctg cggcggctgc gggtctcgtg ggggcggagc ggtcgccgct gccgccgcag
61 ctcgggtcgg gatttgaaag attagaaact tcgggtggag agggcggcgg cgttgaatgt
121 gtggcggaag cgctgggggt cacggctccg cgcgccgccg gacagccggc ggcgtctcca
181 cagcatgaat tacccgggcc gcgggtcccc acggagcccc gagcataacg gccgaggcgg
241 cggcggcggc gcctgggagc tgggctcaga cgcgaggcca gcgttcggcg gcggcgtctg
301 ctgcttcgag cacctgcccg gcggggaccc ggacgacggc gacgtgcccc tggccctgct
361 gcgcggggaa cccgggctgc atttggcgcc gggcaccgac gaccacaacc accacctcgc
421 gctggacccc tgcctcagtg acgagaacta tgacttcagc tccgccgagt cgggctcctc
481 gctgcgctac tacagcgagg gtgagagcgg cggcggcggc agctccttgt cgctgcaccc
541 gccgcagcag cctccgctgg tcccgacgaa ctcggggggc ggcggcgcga caggagggtc
601 ccccggggaa aggaaacgta cccggcttgg cggcccggcg gcccggcacc gctatgaggt
661 agtgacggag ctgggcccgg aggaggtacg ctggttctac aaggaggaca agaagacctg
721 gaagcccttc atcggctacg actcgctccg catcgagctc gccttccgga ccctgctgca
781 gaccacgggt gcccggcccc agggcgggga ccgggacggc gaccatgtgt gctcccccac
841 gggcccagcc tccagttccg gagaagatga cgatgaggac cgcgcctgcg gcttctgcca
901 gagtacgacg gggcacgagc cggagatggt ggagcttgtg aacatcgagc ctgtgtgcgt
961 gcggggcggc ctctacgagg tggatgtgac ccaaggagag tgctacccgg tgtactggaa
1021 ccaggctgat aaaataccag taatgcgtgg acagtggttt attgacggca cttggcagcc
1081 tctagaagag gaagaaagta atttaattga gcaagaacat ctcaattgtt ttaggggcca
1141 gcagatgcag gaaaatttcg atattgaagt gtcaaaatcc atagatggaa aagatgctgt
1201 tcatagtttc aagttgagtc gaaaccatgt ggactggcac agtgtggatg aagtatatct
1261 ttatagtgat gcaacaacat ctaaaattgc aagaacagtt acccaaaaac tgggattttc
1321 taaagcatca agtagtggta ccagacttca tagaggttat gtagaagaag ccacattaga
1381 agacaagcca tcacagacta cccatattgt atttgttgtg catggcattg ggcagaaaat
1441 ggaccaagga agaattatca aaaatacagc tatgatgaga gaagctgcaa gaaaaataga
1501 agaaaggcat ttttccaacc atgcaacaca tgttgaattt ctgcctgttg agtggcggtc
1561 aaaacttact cttgatggag acactgttga ttccattact cctgacaaag tacgaggttt
1621 aagggatatg ctgaacagca gtgcaatgga cataatgtat tatactagtc cactttatag
1681 agatgaacta gttaaaggcc ttcagcaaga gctgaatcga ttgtattccc ttttctgttc
1741 tcggaatcca gactttgaag aaaaaggggg taaagtctca atagtatcac attccttggg
1801 atgtgtaatt acttatgaca taatgactgg ctggaatcca gttcggctgt atgaacagtt
1861 gctgcaaaag gaagaagagt tgcctgatga acgatggatg agctatgaag aacgacatct
1921 tcttgatgaa ctctatataa ctaaacgacg gctgaaggaa atagaagaac ggcttcacgg
1981 attgaaagca tcatctatga cacaaacacc tgccttaaaa tttaaggttg agaatttctt
2041 ctgtatggga tccccattag cagttttctt ggcgttgcgt ggcatccgcc caggaaatac
2101 tggaagtcaa gaccatattt tgcctagaga gatttgtaac cggttactaa atatttttca
2161 tcctacagat ccagtggctt atagattaga accattaata ctgaaacgct acagcaacat
2221 ttcacctgtc cagatccact ggtacaatac ttcaaatcct ttaccttatg aacatatgaa
2281 gccaagcttt ctcaacccag ctaaagaacc tacctcagtt tcagagaatg aaggcatttc
2341 aaccatacca agccctgtga cctcaccagt tttgtcccgc cgacactatg gagaatctat
2401 aacaaatata ggcaaagcaa gcatattagg ggctgctagc attggaaagg gacttggagg
2461 aatgttgttc tcaagatttg gacgttcatc tacaacacag tcatctgaaa catcaaaaga
2521 ctcaatggaa gatgagaaga agccagttgc ctcaccttct gctaccaccg tagggacaca
2581 gacccttcca catagcagtt ctggcttcct cgattctgca ttggagttgg atcacaggat
2641 tgattttgaa ctcagagaag gccttgtgga gagccgctat tggtcagctg tcacgtcgca
2701 tactgcctat tggtcatcct tggatgttgc cctttttctt ttaaccttca tgtataaaca
2761 tgagcacgat gatgatgcaa aacccaattt agatccaatc tgaactctct tgaaggacat
2821 gaatggccta aaactgattt tttttttttc cgttaaaatg tgtgtgtcaa gatacggaga
2881 tttcagggtt aaagtatatt tcagttttct ttagggcaac atatatttga atttaaaagc
2941 actttattta aaaaaaaaag aagttttcag ttctgaagaa gtcatttaca gtttgcatca
3001 ttttaattat gagtctgaca aaaccttctc cagagaatca agcaagacct ggatgtgaag
3061 aaggtttggg taaactgcat gtaaaggcta caaatcacaa tctgattcct cccaaatata
3121 aaggcatatg gaacataatg tattaaccaa agtatgttat aaatcaaaaa tggtcaaggt
3181 tcagcatatt ctatatgaag atcacaaggt ggtatcgttt tagatttcta tgaaggcttt
3241 catttgtaca tccctttgaa aaaatataac agatttaaaa tgttttgaat ttaacttgtt
3301 tagaaaaact aatgcttaaa acaatatttg aactactgta tttataattt attacctcta
3361 attgctttat ttcagtgtat gagacattac tgttttaatg tttgctttga acataattta
3421 agaaccagat ttattttcta tagtgataaa cccttttttc tcagaactcc atctttgtac
3481 tcttcagatg aatatataga cactgtggca tacatttttt ttcattaaaa acttatggct
3541 tcatacaaaa aaaaaaaaaa aaa
//