LOCUS BC030699 3224 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens SHC SH2-domain binding protein 1, mRNA (cDNA clone
MGC:26900 IMAGE:4829528), complete cds.
ACCESSION BC030699
VERSION BC030699.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3224)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3224)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: g Column: 8.
FEATURES Location/Qualifiers
source 1..3224
/db_xref="H-InvDB:HIT000041108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26900 IMAGE:4829528"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3224
/gene="SHCBP1"
/gene_synonym="FLJ22009"
/gene_synonym="MGC26900"
/db_xref="GeneID:79801"
/db_xref="HGNC:HGNC:29547"
CDS 16..2034
/gene="SHCBP1"
/gene_synonym="FLJ22009"
/gene_synonym="MGC26900"
/codon_start=1
/product="SHC SH2-domain binding protein 1"
/protein_id="AAH30699.1"
/db_xref="GeneID:79801"
/db_xref="HGNC:HGNC:29547"
/translation="MADGSLTGGGLEAAAMAPERTGWAVEQELASLEKGLFQDEDSCS
DCSYRDKPGSSLQSFMPEGKTFFPEIFQTNQLLFYERFRAYQDYILADCKASEVQEFT
AEFLEKVLEPSGWRAVWHTNVFKVLVEITDVDFAALKAVVRLAEPYLCDSQVSTFTME
CMKELLDLKEHRLPLQELWVVFDDSGVFDQTALAIEHVRFFYQNIWRSWDEEEEDEYD
YFVRCVEPRLRLHYDILEDRVPSGLIVDYHNLLSQCEESYRKFLNLRSSLSNCNSDSE
QENISMVEGLKLYSEMEQLKQKLKLIENPLLRYVFGYQKNSNIQAKGVRSSGQKITHV
VSSTMMAGLLRSLLTDRLCQEPGEEEREIQFHSDPLSAINACFEGDTVIVCPGHYVVH
GTFSIADSIELEGYGLPDDIVIEKRGKGDTFVDCTGADIKISGIKFVQHDAVEGILIV
HRGKTTLENCVLQCETTGVTVRTSAEFLMKNSDLYGAKGAGIEIYPGSQCTLSDNGIH
HCKEGILIKDFLDEHYDIPKISMVNNIIHNNEGYGVVLVKPTIFSDLQESAEDGTEEN
KALKIQTSGEPDVAERVDLEELIECATGKMELCARTDPSEQVEGNCEIVNELIAASTQ
KGQIKKKRLSELGITQADDNLMSQEMFVGIVGNQFKWNGKGSFGTFLF"
BASE COUNT 951 a 557 c 801 g 915 t
ORIGIN
1 agcggtaaat ttgaaatggc tgacgggtcg ctgacgggcg gcggtctgga ggcagcggcc
61 atggcgccgg agcgcacggg ctgggcggtg gagcaggagc tggcgtctct ggagaaaggt
121 ttgttccaag atgaagattc atgcagtgat tgtagctacc gtgataaacc aggttctagt
181 ttacaaagtt ttatgccaga aggaaaaacc tttttcccag aaattttcca aacaaatcaa
241 cttttgttct atgagcgatt cagagcctat caagattaca ttttagctga ctgcaaggcc
301 tctgaggtac aggaattcac agctgagttc ttggagaagg tccttgagcc atctggatgg
361 cgggcagtct ggcacactaa tgtgttcaag gtgctggttg agatcacaga tgtggacttt
421 gcagccttga aggcagtggt gaggcttgct gaaccatacc tctgtgactc tcaagtgagc
481 acttttacca tggagtgcat gaaggagctc cttgatctga aggagcatcg gttgcccctg
541 caggagctgt gggtggtgtt tgatgattca ggagtgtttg accagacagc ccttgcaatt
601 gagcatgtca gatttttcta ccaaaacatt tggaggagtt gggatgaaga agaggaggat
661 gaatacgatt attttgtcag atgtgttgaa cctcgattaa gattgcatta tgacattctt
721 gaagaccgag ttccatcagg acttattgtt gactaccaca atctgttgtc tcaatgtgag
781 gagagttaca ggaaattttt aaatctgaga agcagtttgt caaattgtaa ctctgattcc
841 gagcaggaaa atatctccat ggtggaaggg ttaaaattgt attcggagat ggaacagttg
901 aaacaaaagc tgaaactcat tgagaatcct ttgttgaggt atgtgtttgg ttatcagaag
961 aattctaaca tccaagcaaa gggtgtccgt tccagcggtc agaagatcac tcatgtggtc
1021 tcctccacca tgatggctgg tctcctgcgg tccctgctta cggacaggct ttgccaggag
1081 cctggtgagg aagaaagaga aattcagttc catagtgatc cattgtctgc tataaatgcc
1141 tgcttcgaag gtgacactgt tattgtttgt cctggccatt atgtggtaca tggcactttc
1201 tccattgctg actccattga gttggaagga tatggcctac cagatgacat tgtgatagaa
1261 aagaggggca aaggcgacac ttttgtggac tgcactggtg ctgatattaa aatctcaggc
1321 ataaaatttg ttcagcatga tgctgtagag ggaatcttaa ttgttcaccg tggtaagact
1381 acgctggaaa actgtgtgct gcagtgtgag acgaccggag tcacagtgcg gacatcagca
1441 gagtttctaa tgaagaactc ggatttatat ggcgccaagg gtgctggtat agaaatctac
1501 cctgggagtc agtgcaccct gagtgacaat gggatccatc actgcaagga agggatcctc
1561 attaaggact tcttagatga acattatgac attcccaaga tatccatggt gaataatata
1621 atacataata atgaaggtta tggtgttgtc ttggtgaaac ctacaatctt ctctgacctg
1681 caagaaagtg ctgaagatgg aactgaagaa aataaagcgc ttaaaattca gacaagtgga
1741 gagccagatg tggctgaaag agtggatcta gaagagctga ttgagtgtgc aactggtaaa
1801 atggagcttt gtgcaagaac tgacccttct gagcaagtcg agggaaattg tgaaattgta
1861 aatgaactaa ttgctgcctc cacacagaaa ggccagataa agaagaaaag gttgagtgaa
1921 ctggggatca cgcaagctga tgacaactta atgtcacagg agatgtttgt tgggattgtg
1981 gggaaccagt tcaagtggaa tgggaaaggt agttttggca catttctttt ctgactacag
2041 tgatgtaagt agatagcaaa atactggatt ttgcacatgc tgccctaaga atcactgctg
2101 ccattgtagt ttgctgtatt gtctgtattt tatatttgat tatttgggct tgagtgaaag
2161 gtagatttat ttccatttgc aggtgttgca cataaaacac tccctcttta taagaaaaat
2221 cataaatgca tataaaatag aaaatatttg gagattgctt atctgaaagt cttgctttct
2281 tatacacatg gttctctcat attaagcctg gtggtaactt tttagtgtaa ttacctttag
2341 cacttcaaag acgaggaagt aaggaaggga atgcaagact agtgcataaa aatgcaatag
2401 gtgtcatatg tacagcattc ttcttagagt tgccttttca tcccaattac agtgagtctg
2461 atttccatcc tgtatttgca taatacttgt cttaaaataa aagcttttat gattgggaat
2521 ttatctgcct aatcagactt attattgaga cgtcaatggg acgcattttt ctgttgagct
2581 atgcagtcgt caaaacagcg atagacagca taggaggttt gaagcagaaa tgaaatgtgt
2641 tattcagagc caatgttgta catagagcat tttcactatt gctgaatggg aatgattaaa
2701 aacaaggtat ttttcgggcc aggcggtggc tcacgcttgt aatcgcagca ctttgggagg
2761 ctgaggcagg aggatcactt gagcccagga gttcaagact agcctaggca acatagtgag
2821 accctgtctc tactaaaaat aaatttaaaa aaaattagct gagtgtggtg gtgcatgcat
2881 gtagttccag ctactcagga ggctgaggct agaggatcct tgagcccagg aggttgaggc
2941 tgcagtgagg tgtgattgcg ccactgcatt ccagcttggg cgacagagcg agacccagtc
3001 tcaaaaaaaa aaaaagtatt tttctcttac cgttacagta ttctgattat attactgaca
3061 cagtcaaaat gattaactgt acaacctgta tctgctgggt gttcttgtta tcatattgta
3121 aaacagcttt aaaaatattt atattttaaa aactgtatgt gacattaata tgcctaatga
3181 ttaaaattat agtgatgaaa taacaaagaa aaaaaaaaaa aaaa
//