LOCUS BC030659 2117 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 11, mRNA (cDNA clone MGC:33354 IMAGE:4838801),
complete cds.
ACCESSION BC030659
VERSION BC030659.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2117)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2117)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC030659.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059794.
FEATURES Location/Qualifiers
source 1..2117
/db_xref="H-InvDB:HIT000041094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33354 IMAGE:4838801"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2117
/gene="ALS2CR11"
/gene_synonym="FLJ25351"
/db_xref="GeneID:151254"
/db_xref="HGNC:HGNC:14438"
CDS 46..1917
/gene="ALS2CR11"
/gene_synonym="FLJ25351"
/codon_start=1
/product="amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 11"
/protein_id="AAH30659.1"
/db_xref="GeneID:151254"
/db_xref="HGNC:HGNC:14438"
/translation="MEPPQETNRPFSTLDNRSGQVQVLSATPLLQRNPYSSPDIMHIK
GSEASSVPYALNQGTTALPKNKNQEGTGHRLLNMLRKTLKESDSEELEITQETPNLVP
FGDVVGCLGIHIKNCRHFMPKISLQHYANLFIRISINKAVKCTKMCSLLSKNDEKNTV
IKFDEVKYFSVQVPRRYDDKRNNILLELIQYDNREKRAFLLGSVQIHLYEVIQKGCFI
EEVQVLHGNIFVCRLEVEFMFSYGNFGYGFSHQLKPLQKITEPSMFMNLAPPPERTDP
VTKVITPQTVEYPAFLSPDLNVTVGTPAVQSSNQPSVVRLEKLQQQPRERLEKMKKEY
RNLNTWIDKANYLESILMPKLEHKDSEETNIDEASENTKSNQPEEELENIVGVDIPLV
NEEAETTANELLDNDSEKGLTIPTLNQSDQDNSTADASKNDESTPSPTEVHSLCTISN
QETIKAGRIPPLGERQSESMPDRKMKNVFFPLEVKLKDNYPSILKADSSLSEVAFSPK
EYNSPSFRPEYIEFKPKFQDCSDKFEDLHDMTSFTHLKKVKSRSRLLGKSSDDIHNHA
RHSARPYTAPEVNKQRESYSGKFTSRRMVSSGLVHINDKTSDYEMHKMRPKKIKRGY"
BASE COUNT 755 a 406 c 422 g 534 t
ORIGIN
1 agcgggccgt cggttgggcg cagacaggcc gcagaagatg gagagatgga gccaccccaa
61 gagacaaata ggcctttcag cacacttgat aaccgcagcg ggcaggtcca agtcctgtcc
121 gccaccccgc tattgcagag gaatccctac agcagcccgg atatcatgca cattaaaggg
181 tcggaggctt cttcggtccc ttacgccctg aaccagggca cgacggccct gcctaagaac
241 aagaaccagg agggcaccgg gcaccggctg ctgaacatgc tgagaaaaac tcttaaagag
301 tctgatagtg aagaactgga aataacacag gagacaccaa atttggtgcc atttggggat
361 gtggttggct gcctgggcat tcatataaag aactgcagac attttatgcc taagatcagt
421 ttacaacatt atgctaattt attcattcgc atctctataa acaaagctgt gaaatgtaca
481 aaaatgtgta gcttgctatc caaaaacgat gagaagaaca ctgtaattaa gttcgatgaa
541 gtgaagtatt tttctgtaca ggttcccaga cgttatgatg ataagcggaa taatatttta
601 ttggaactca tacaatatga caatagagaa aaacgtgctt tcttgttagg gagtgttcag
661 atacatcttt atgaggtaat tcagaaaggg tgcttcattg aagaggtcca agtgttgcat
721 ggaaacatat ttgtctgcag gctggaggtg gaatttatgt tctcctatgg aaactttggt
781 tatggatttt cacatcagtt aaaacctctt cagaaaatta ctgagccatc catgtttatg
841 aatcttgcac cacctccaga aagaacagat cccgtgacaa aagttattac accacagaca
901 gtagaatatc cagcattctt atccccagac ctgaatgtta ctgttgggac tccagctgtg
961 caatcctcca accagccatc tgtagtgcga cttgaaaaac ttcagcaaca accccgggaa
1021 aggctggaaa agatgaaaaa agaatataga aatctgaata catggataga taaagctaac
1081 tatttagaaa gcattctaat gccaaaattg gaacataagg attctgagga aactaatata
1141 gatgaggcat ctgaaaacac gaaaagtaat caacctgaag aggagcttga aaatattgta
1201 ggagtagata tccctcttgt aaatgaggaa gctgaaacta ctgcaaatga gttactggat
1261 aatgattctg agaaaggcct gactatacca actttgaacc aatcggacca agataattca
1321 actgctgatg cttctaaaaa tgatgaatca acaccttcac ccacagaagt gcactcattg
1381 tgcactattt ctaaccagga aacaataaaa gcaggcagaa taccaccttt aggtgaacgt
1441 caatcagaaa gcatgccaga cagaaaaatg aaaaatgtat tttttccatt agaagtaaaa
1501 ttaaaagata actatccaag cattttaaaa gcagactcat ctctatcaga ggtggctttt
1561 tcaccaaaag aatataattc accatctttc agaccagaat atatagaatt caaaccaaaa
1621 tttcaggatt gttcagataa atttgaggat ttacatgaca tgacctcatt tacacacctt
1681 aaaaaagtaa aatcaagatc aaggctttta ggaaaaagct cagatgatat ccataaccat
1741 gccagacact ctgcaagacc atatactgct ccggaggtta acaagcaacg agaaagctac
1801 agtggaaagt ttacaagtcg tcgaatggtt tcatcaggct tagttcatat aaatgataaa
1861 acatcagatt atgaaatgca taaaatgcgg ccaaaaaaaa ttaaaagagg atattgaaaa
1921 atgttcgctc atttgtgata ttataaaaca tgtttaactc agaatgatat gtgaggccag
1981 cagtcagaat atcacttctc cattaacaaa atggtttgga gatctcttct tttgtgtgac
2041 agaagtcagc aaccaaattt catcttgtta gaaccatttt gttttgatta aaatgaaaaa
2101 caaaaaaaaa aaaaaaa
//